Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005874 |
| length | 808 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 5 |
| gene id | AMCG00005874 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11339604 ~ 11343604 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K24021 | PLEKHJ; pleckstrin homology domain-containing family J |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194957 | lncRNA | upstream | 159367 | 11174395 ~ 11180237 (+) | True | G154775 |
| TU194890 | lncRNA | upstream | 340215 | 10997649 ~ 10999389 (+) | True | G154722 |
| TU194697 | lncRNA | upstream | 624897 | 10690143 ~ 10714707 (+) | False | AMCG00005835 |
| TU194699 | lncRNA | upstream | 645651 | 10690143 ~ 10693953 (+) | True | AMCG00005835 |
| TU194696 | lncRNA | upstream | 671343 | 10667998 ~ 10668261 (+) | True | G154583 |
| TU195006 | lncRNA | downstream | 18401 | 11362005 ~ 11362233 (+) | True | G154815 |
| TU195007 | lncRNA | downstream | 26820 | 11370424 ~ 11370912 (+) | True | G154816 |
| TU195024 | lncRNA | downstream | 35176 | 11378780 ~ 11379289 (+) | True | G154831 |
| TU195034 | lncRNA | downstream | 62756 | 11406360 ~ 11409432 (+) | False | AMCG00005907 |
| TU195045 | lncRNA | downstream | 72461 | 11416065 ~ 11416329 (+) | True | G154847 |
| AMCG00005873 | mRNA | upstream | 8483 | 11324831 ~ 11331121 (+) | True | AMCG00005873 |
| AMCG00005853 | mRNA | upstream | 95806 | 11242839 ~ 11243798 (+) | True | AMCG00005853 |
| AMCG00005854 | mRNA | upstream | 133015 | 11205387 ~ 11206589 (+) | True | AMCG00005854 |
| AMCG00005816 | mRNA | upstream | 167530 | 11171014 ~ 11172074 (+) | True | AMCG00005816 |
| AMCG00005815 | mRNA | upstream | 198772 | 11139798 ~ 11140832 (+) | True | AMCG00005815 |
| AMCG00005907 | mRNA | downstream | 62702 | 11406306 ~ 11409672 (+) | True | AMCG00005907 |
| AMCG00005906 | mRNA | downstream | 113894 | 11457498 ~ 11460743 (+) | True | AMCG00005906 |
| AMCG00005908 | mRNA | downstream | 134091 | 11477695 ~ 11486383 (+) | True | AMCG00005908 |
| AMCG00005865 | mRNA | downstream | 151537 | 11495141 ~ 11507437 (+) | True | AMCG00005865 |
| AMCG00005866 | mRNA | downstream | 214845 | 11558449 ~ 11562627 (+) | True | AMCG00005866 |
| TU194985 | other | upstream | 14530 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU194931 | other | upstream | 253593 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194894 | other | upstream | 329250 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU194757 | other | upstream | 423875 | 10913397 ~ 10915729 (+) | True | G154636 |
| TU194711 | other | upstream | 609395 | 10722332 ~ 10730209 (+) | False | AMCG00005834 |
| TU195111 | other | downstream | 258823 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU195202 | other | downstream | 559782 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
| TU195527 | other | downstream | 1348212 | 12691816 ~ 12696319 (+) | False | AMCG00005987 |
| TU195528 | other | downstream | 1349156 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
| TU195530 | other | downstream | 1353744 | 12697348 ~ 12698530 (+) | False | AMCG00005987 |
