Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005889 |
| length | 1185 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 7 |
| gene id | AMCG00005889 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11675135 ~ 11680822 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | biological_process |
| GO:0030176 | integral component of endoplasmic reticulum membrane | cellular_component |
| GO:0005740 | mitochondrial envelope | cellular_component |
| GO:0005528 | FK506 binding | molecular_function |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| id | description |
|---|---|
| K09574 | FKBP8; FK506-binding protein 8 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195122 | lncRNA | downstream | 60752 | 11613674 ~ 11614383 (-) | True | G154909 |
| TU195118 | lncRNA | downstream | 61524 | 11569273 ~ 11613611 (-) | False | G154906 |
| TU195117 | lncRNA | downstream | 61524 | 11609836 ~ 11613611 (-) | True | G154906 |
| TU195046 | lncRNA | downstream | 258747 | 11415817 ~ 11416388 (-) | True | G154848 |
| TU195025 | lncRNA | downstream | 298930 | 11374506 ~ 11376205 (-) | False | AMCG00005875 |
| TU195177 | lncRNA | upstream | 8918 | 11689740 ~ 11690048 (-) | True | G154954 |
| TU195245 | lncRNA | upstream | 251290 | 11932112 ~ 11932947 (-) | True | G155003 |
| TU195312 | lncRNA | upstream | 322318 | 12003140 ~ 12023672 (-) | True | G155058 |
| TU195313 | lncRNA | upstream | 326646 | 12007468 ~ 12017366 (-) | True | G155059 |
| TU195331 | lncRNA | upstream | 444339 | 12125161 ~ 12126128 (-) | True | G155073 |
| AMCG00005891 | mRNA | downstream | 783 | 11670353 ~ 11674352 (-) | True | AMCG00005891 |
| AMCG00005888 | mRNA | downstream | 25813 | 11637138 ~ 11649322 (-) | True | AMCG00005888 |
| AMCG00005887 | mRNA | downstream | 47203 | 11622428 ~ 11627932 (-) | True | AMCG00005887 |
| AMCG00005890 | mRNA | downstream | 58322 | 11615392 ~ 11616813 (-) | True | AMCG00005890 |
| AMCG00005912 | mRNA | downstream | 205375 | 11463610 ~ 11469760 (-) | True | AMCG00005912 |
| AMCG00005884 | mRNA | upstream | 157179 | 11838001 ~ 11863038 (-) | True | AMCG00005884 |
| AMCG00005900 | mRNA | upstream | 216196 | 11897018 ~ 11902390 (-) | True | AMCG00005900 |
| AMCG00005899 | mRNA | upstream | 225744 | 11906566 ~ 11918065 (-) | True | AMCG00005899 |
| AMCG00005901 | mRNA | upstream | 237966 | 11918788 ~ 11930850 (-) | True | AMCG00005901 |
| AMCG00005905 | mRNA | upstream | 303841 | 11984663 ~ 11993731 (-) | True | AMCG00005905 |
| TU195020 | other | downstream | 320502 | 11349245 ~ 11354633 (-) | False | AMCG00005879 |
| TU195016 | other | downstream | 336021 | 11336774 ~ 11339114 (-) | False | AMCG00005877 |
| TU195013 | other | downstream | 350068 | 11320737 ~ 11325067 (-) | False | AMCG00005876 |
| TU194815 | other | downstream | 762390 | 10910516 ~ 10912745 (-) | True | G154677 |
| TU194821 | other | downstream | 764703 | 10906295 ~ 10910432 (-) | False | G154677 |
| TU195574 | other | upstream | 990830 | 12671652 ~ 12672458 (-) | False | AMCG00005989 |
| TU195614 | other | upstream | 1162956 | 12843778 ~ 12854803 (-) | False | AMCG00006063 |
| TU196074 | other | upstream | 2487268 | 14168090 ~ 14171607 (-) | False | AMCG00005997 |
| TU196147 | other | upstream | 2656069 | 14336891 ~ 14340663 (-) | True | AMCG00006013 |
| TU196220 | other | upstream | 2828411 | 14509233 ~ 14509614 (-) | True | G155770 |
