Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005903 |
| length | 1070 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 9 |
| gene id | AMCG00005903 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11996824 ~ 12003499 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K11982 | RNF115_126; E3 ubiquitin-protein ligase RNF115/126 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195266 | lncRNA | upstream | 9900 | 11984663 ~ 11986924 (+) | True | G155018 |
| TU195210 | lncRNA | upstream | 84724 | 11906641 ~ 11912100 (+) | True | G154979 |
| TU195135 | lncRNA | upstream | 356898 | 11639686 ~ 11639926 (+) | True | G154917 |
| TU195134 | lncRNA | upstream | 358050 | 11638324 ~ 11638774 (+) | True | G154916 |
| TU195133 | lncRNA | upstream | 358805 | 11632091 ~ 11638019 (+) | True | G154915 |
| TU195305 | lncRNA | downstream | 198237 | 12201736 ~ 12203472 (+) | True | G155053 |
| TU195472 | lncRNA | downstream | 443981 | 12447480 ~ 12447684 (+) | True | G155182 |
| TU195509 | lncRNA | downstream | 541723 | 12545222 ~ 12585408 (+) | True | G155207 |
| TU195499 | lncRNA | downstream | 549926 | 12553425 ~ 12554767 (+) | False | G155206 |
| TU195507 | lncRNA | downstream | 607684 | 12611183 ~ 12631371 (+) | True | G155206 |
| AMCG00005897 | mRNA | upstream | 24751 | 11952361 ~ 11972073 (+) | True | AMCG00005897 |
| AMCG00005898 | mRNA | upstream | 58438 | 11935849 ~ 11938386 (+) | True | AMCG00005898 |
| AMCG00005896 | mRNA | upstream | 61617 | 11932184 ~ 11935207 (+) | True | AMCG00005896 |
| AMCG00005895 | mRNA | upstream | 90737 | 11903352 ~ 11906087 (+) | True | AMCG00005895 |
| AMCG00005883 | mRNA | upstream | 172187 | 11802432 ~ 11824637 (+) | True | AMCG00005883 |
| AMCG00005904 | mRNA | downstream | 10029 | 12013528 ~ 12017391 (+) | True | AMCG00005904 |
| AMCG00005902 | mRNA | downstream | 24182 | 12027681 ~ 12068052 (+) | True | AMCG00005902 |
| AMCG00005894 | mRNA | downstream | 143993 | 12147492 ~ 12165856 (+) | True | AMCG00005894 |
| AMCG00005892 | mRNA | downstream | 166581 | 12170080 ~ 12171314 (+) | True | AMCG00005892 |
| AMCG00005958 | mRNA | downstream | 174741 | 12178240 ~ 12190647 (+) | True | AMCG00005958 |
| TU195202 | other | upstream | 90980 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
| TU195111 | other | upstream | 391549 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU194985 | other | upstream | 671750 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU194931 | other | upstream | 910813 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194894 | other | upstream | 986470 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU195527 | other | downstream | 688317 | 12691816 ~ 12696319 (+) | False | AMCG00005987 |
| TU195528 | other | downstream | 689261 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
| TU195530 | other | downstream | 693849 | 12697348 ~ 12698530 (+) | False | AMCG00005987 |
| TU195532 | other | downstream | 702992 | 12706491 ~ 12707437 (+) | False | AMCG00005987 |
| TU195534 | other | downstream | 708279 | 12711778 ~ 12714013 (+) | False | AMCG00005984 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031640 | True | 4071 | mRNA | 0.39 | 9 | NC_007113.7 | 54844755 ~ 54980150 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000075_00448756_00452145.mRNA | True | 1786 | mRNA | 0.38 | 7 | CI01000075 | 447768 ~ 452145 (-) |
