RNA id: AMCG00005929



Basic Information


Item Value
RNA id AMCG00005929
length 326
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00005929
representative False

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10267273 ~ 10356244 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgattgattgattgattgattgattgattgattgattgattgataaccAGTGAAATGATAGGTTAACCAGGGCGGGGGAAAAAGTAGCTCAGTAGCACCAGCCCAGCAAAGGATAATTGTCAGCCTTGGCGCAGCCCGGAACGCTGTTTAAGCCAAAGCCAAAGCTTGGCTTCTGGGCCTGTGAGGAGGACGAGTGCGGCGGGACAGGACAGTTGGCCGGGCAGCAGCTGAGCTGGGCGGAGCTGCAACCTGCACATCCATGCAGAATCCAGTCATTGCTCAGTTCTGTTGCCAATAACCTTCAGCACCTGGGGGGCAAGAGATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194448 lncRNA upstream 187837 10078307 ~ 10079436 (+) True G154388
TU194391 lncRNA upstream 323130 9905772 ~ 9944143 (+) True G154343
TU194291 lncRNA upstream 825892 9440493 ~ 9441381 (+) True G154252
TU194189 lncRNA upstream 1073086 9192296 ~ 9194187 (+) True G154175
TU194154 lncRNA upstream 1158903 9100429 ~ 9108370 (+) False G154147
TU194528 lncRNA downstream 14054 10285514 ~ 10332094 (+) False G154447
TU194535 lncRNA downstream 31497 10302957 ~ 10303497 (+) True G154451
TU194536 lncRNA downstream 32758 10304218 ~ 10304909 (+) False AMCG00005851
TU194527 lncRNA downstream 56575 10328035 ~ 10328999 (+) True G154447
TU194560 lncRNA downstream 148446 10419906 ~ 10489854 (+) False G154473
AMCG00005927 mRNA upstream 5808 10260649 ~ 10261465 (+) True AMCG00005927
AMCG00005928 mRNA upstream 48948 10207320 ~ 10218325 (+) True AMCG00005928
AMCG00005934 mRNA upstream 130557 10132128 ~ 10136716 (+) True AMCG00005934
AMCG00005802 mRNA upstream 177504 10076345 ~ 10089769 (+) True AMCG00005802
AMCG00005798 mRNA upstream 214464 10043818 ~ 10052809 (+) True AMCG00005798
AMCG00005851 mRNA downstream 26429 10297889 ~ 10304837 (+) True AMCG00005851
AMCG00005820 mRNA downstream 141065 10412525 ~ 10416137 (+) True AMCG00005820
AMCG00005819 mRNA downstream 151649 10423109 ~ 10428966 (+) True AMCG00005819
AMCG00005817 mRNA downstream 160103 10431563 ~ 10436502 (+) True AMCG00005817
AMCG00005821 mRNA downstream 191375 10462835 ~ 10469406 (+) True AMCG00005821
TU194450 other upstream 179581 10080435 ~ 10087692 (+) False AMCG00005802
TU194427 other upstream 190771 10065160 ~ 10076502 (+) False AMCG00005802
TU194377 other upstream 383318 9881382 ~ 9883955 (+) True G154330
TU194323 other upstream 677475 9587802 ~ 9589798 (+) True G154283
TU194290 other upstream 829004 9435900 ~ 9438269 (+) True G154251
TU194579 other downstream 191077 10462537 ~ 10468351 (+) False AMCG00005821
TU194578 other downstream 199083 10470543 ~ 10471631 (+) True G154486
TU194591 other downstream 241044 10512504 ~ 10516390 (+) True G154499
TU194711 other downstream 450872 10722332 ~ 10730209 (+) False AMCG00005834
TU194757 other downstream 641937 10913397 ~ 10915729 (+) True G154636

Expression Profile