Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005942 |
| length | 445 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | AMCG00005942 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 13238322 ~ 13240049 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007155 | cell adhesion | biological_process |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195708 | lncRNA | upstream | 188128 | 13049834 ~ 13050194 (+) | True | G155362 |
| TU195706 | lncRNA | upstream | 190156 | 13047964 ~ 13048166 (+) | True | G155360 |
| TU195705 | lncRNA | upstream | 190427 | 13047575 ~ 13047895 (+) | True | G155359 |
| TU195703 | lncRNA | upstream | 192286 | 13045150 ~ 13046036 (+) | True | G155358 |
| TU195702 | lncRNA | upstream | 193763 | 13044269 ~ 13044559 (+) | True | G155357 |
| TU195786 | lncRNA | downstream | 33558 | 13273607 ~ 13274658 (+) | True | G155427 |
| TU195814 | lncRNA | downstream | 141732 | 13381781 ~ 13386048 (+) | True | G155452 |
| TU195853 | lncRNA | downstream | 250892 | 13490941 ~ 13563786 (+) | True | G155480 |
| TU195854 | lncRNA | downstream | 288305 | 13528354 ~ 13672034 (+) | False | G155481 |
| TU195855 | lncRNA | downstream | 288305 | 13528354 ~ 13581642 (+) | True | G155481 |
| AMCG00005926 | mRNA | upstream | 121141 | 13110844 ~ 13117181 (+) | True | AMCG00005926 |
| AMCG00005925 | mRNA | upstream | 130499 | 13097069 ~ 13107823 (+) | True | AMCG00005925 |
| AMCG00005964 | mRNA | upstream | 204914 | 13028579 ~ 13033408 (+) | True | AMCG00005964 |
| AMCG00005963 | mRNA | upstream | 218028 | 12995584 ~ 13020294 (+) | True | AMCG00005963 |
| AMCG00005965 | mRNA | upstream | 242842 | 12969874 ~ 12995480 (+) | True | AMCG00005965 |
| AMCG00005941 | mRNA | downstream | 4745 | 13244794 ~ 13250175 (+) | True | AMCG00005941 |
| AMCG00005940 | mRNA | downstream | 26333 | 13266382 ~ 13273509 (+) | True | AMCG00005940 |
| AMCG00005950 | mRNA | downstream | 157441 | 13397490 ~ 13408360 (+) | True | AMCG00005950 |
| AMCG00005951 | mRNA | downstream | 201818 | 13441867 ~ 13458187 (+) | True | AMCG00005951 |
| AMCG00005949 | mRNA | downstream | 224496 | 13464545 ~ 13467370 (+) | True | AMCG00005949 |
| TU195694 | other | upstream | 204914 | 13025764 ~ 13033408 (+) | False | AMCG00005964 |
| TU195534 | other | upstream | 524309 | 12711778 ~ 12714013 (+) | False | AMCG00005984 |
| TU195532 | other | upstream | 530885 | 12706491 ~ 12707437 (+) | False | AMCG00005987 |
| TU195530 | other | upstream | 539792 | 12697348 ~ 12698530 (+) | False | AMCG00005987 |
| TU195528 | other | upstream | 542003 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
| TU196052 | other | downstream | 857755 | 14097804 ~ 14098696 (+) | True | G155637 |
| TU196053 | other | downstream | 868124 | 14108173 ~ 14109870 (+) | True | G155638 |
| TU196155 | other | downstream | 1135946 | 14375995 ~ 14383580 (+) | True | AMCG00006009 |
| TU196402 | other | downstream | 1863407 | 15103456 ~ 15105567 (+) | True | AMCG00006092 |
| TU196404 | other | downstream | 1867160 | 15107209 ~ 15107734 (+) | True | G155932 |
