Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005957 |
| length | 1225 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | AMCG00005957 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 12251032 ~ 12255803 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | biological_process |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| K17268 | COPE; coatomer subunit epsilon |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195263 | lncRNA | upstream | 43078 | 11970824 ~ 12207954 (+) | True | G155017 |
| TU195305 | lncRNA | upstream | 47560 | 12201736 ~ 12203472 (+) | True | G155053 |
| TU195266 | lncRNA | upstream | 264108 | 11984663 ~ 11986924 (+) | True | G155018 |
| TU195210 | lncRNA | upstream | 338932 | 11906641 ~ 11912100 (+) | True | G154979 |
| TU195135 | lncRNA | upstream | 611106 | 11639686 ~ 11639926 (+) | True | G154917 |
| TU195472 | lncRNA | downstream | 191677 | 12447480 ~ 12447684 (+) | True | G155182 |
| TU195509 | lncRNA | downstream | 289419 | 12545222 ~ 12585408 (+) | True | G155207 |
| TU195499 | lncRNA | downstream | 297622 | 12553425 ~ 12554767 (+) | False | G155206 |
| TU195507 | lncRNA | downstream | 355380 | 12611183 ~ 12631371 (+) | True | G155206 |
| TU195624 | lncRNA | downstream | 635283 | 12891086 ~ 12891396 (+) | True | G155304 |
| AMCG00005954 | mRNA | upstream | 15209 | 12225862 ~ 12235823 (+) | True | AMCG00005954 |
| AMCG00005955 | mRNA | upstream | 30510 | 12213629 ~ 12220522 (+) | True | AMCG00005955 |
| AMCG00005958 | mRNA | upstream | 60385 | 12178240 ~ 12190647 (+) | True | AMCG00005958 |
| AMCG00005892 | mRNA | upstream | 79718 | 12170080 ~ 12171314 (+) | True | AMCG00005892 |
| AMCG00005894 | mRNA | upstream | 85176 | 12147492 ~ 12165856 (+) | True | AMCG00005894 |
| AMCG00005956 | mRNA | downstream | 802 | 12256605 ~ 12269763 (+) | True | AMCG00005956 |
| AMCG00005915 | mRNA | downstream | 182485 | 12438288 ~ 12443887 (+) | True | AMCG00005915 |
| AMCG00005921 | mRNA | downstream | 235838 | 12491641 ~ 12493573 (+) | True | AMCG00005921 |
| AMCG00005920 | mRNA | downstream | 266068 | 12521871 ~ 12544857 (+) | True | AMCG00005920 |
| AMCG00005922 | mRNA | downstream | 305894 | 12561697 ~ 12605848 (+) | True | AMCG00005922 |
| TU195202 | other | upstream | 345188 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
| TU195111 | other | upstream | 645757 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU194985 | other | upstream | 925958 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU194931 | other | upstream | 1165021 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194894 | other | upstream | 1240678 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU195527 | other | downstream | 436013 | 12691816 ~ 12696319 (+) | False | AMCG00005987 |
| TU195528 | other | downstream | 436957 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
| TU195530 | other | downstream | 441545 | 12697348 ~ 12698530 (+) | False | AMCG00005987 |
| TU195532 | other | downstream | 450688 | 12706491 ~ 12707437 (+) | False | AMCG00005987 |
| TU195534 | other | downstream | 455975 | 12711778 ~ 12714013 (+) | False | AMCG00005984 |
