Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005970 |
| length | 976 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | AMCG00005970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 13714984 ~ 13718428 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | cellular_component |
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | molecular_function |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | molecular_function |
| id | description |
|---|---|
| K02134 | ATPeF1D, ATP5D, ATP16; F-type H+-transporting ATPase subunit delta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195905 | lncRNA | downstream | 16450 | 13665734 ~ 13698534 (-) | True | AMCG00005971 |
| TU195906 | lncRNA | downstream | 20882 | 13664064 ~ 13694102 (-) | False | AMCG00005971 |
| TU195907 | lncRNA | downstream | 37647 | 13675209 ~ 13677337 (-) | True | G155521 |
| TU195898 | lncRNA | downstream | 136185 | 13568579 ~ 13578799 (-) | False | AMCG00005977 |
| TU195883 | lncRNA | downstream | 230965 | 13466970 ~ 13484019 (-) | True | G155503 |
| TU195941 | lncRNA | upstream | 67578 | 13786006 ~ 13787634 (-) | True | G155550 |
| TU196001 | lncRNA | upstream | 158295 | 13876723 ~ 13881170 (-) | True | G155591 |
| TU196003 | lncRNA | upstream | 165163 | 13883591 ~ 13884628 (-) | True | G155593 |
| TU196072 | lncRNA | upstream | 370908 | 14089336 ~ 14092457 (-) | True | G155652 |
| TU196075 | lncRNA | upstream | 447751 | 14166179 ~ 14166404 (-) | True | G155655 |
| AMCG00005971 | mRNA | downstream | 21592 | 13669280 ~ 13693392 (-) | False | AMCG00005971 |
| AMCG00005977 | mRNA | downstream | 131633 | 13568467 ~ 13583351 (-) | True | AMCG00005977 |
| AMCG00005978 | mRNA | downstream | 147503 | 13561072 ~ 13567481 (-) | True | AMCG00005978 |
| AMCG00005976 | mRNA | downstream | 181100 | 13530876 ~ 13533884 (-) | True | AMCG00005976 |
| AMCG00005953 | mRNA | downstream | 252424 | 13462216 ~ 13462560 (-) | True | AMCG00005953 |
| AMCG00005969 | mRNA | upstream | 33560 | 13751988 ~ 13761430 (-) | True | AMCG00005969 |
| AMCG00005972 | mRNA | upstream | 54054 | 13772482 ~ 13785885 (-) | True | AMCG00005972 |
| AMCG00006003 | mRNA | upstream | 74934 | 13793362 ~ 13800830 (-) | True | AMCG00006003 |
| AMCG00006005 | mRNA | upstream | 95764 | 13814192 ~ 13827586 (-) | True | AMCG00006005 |
| AMCG00006004 | mRNA | upstream | 112489 | 13830917 ~ 13841962 (-) | True | AMCG00006004 |
| TU195614 | other | downstream | 860181 | 12843778 ~ 12854803 (-) | False | AMCG00006063 |
| TU195574 | other | downstream | 1042526 | 12671652 ~ 12672458 (-) | False | AMCG00005989 |
| TU195020 | other | downstream | 2360351 | 11349245 ~ 11354633 (-) | False | AMCG00005879 |
| TU195016 | other | downstream | 2375870 | 11336774 ~ 11339114 (-) | False | AMCG00005877 |
| TU195013 | other | downstream | 2389917 | 11320737 ~ 11325067 (-) | False | AMCG00005876 |
| TU196074 | other | upstream | 449662 | 14168090 ~ 14171607 (-) | False | AMCG00005997 |
| TU196147 | other | upstream | 618463 | 14336891 ~ 14340663 (-) | True | AMCG00006013 |
| TU196220 | other | upstream | 790805 | 14509233 ~ 14509614 (-) | True | G155770 |
| TU196273 | other | upstream | 961369 | 14679797 ~ 14682961 (-) | True | AMCG00006037 |
| TU196327 | other | upstream | 1064203 | 14782631 ~ 14784006 (-) | False | AMCG00006043 |
