RNA id: AMCG00006013



Basic Information


Item Value
RNA id AMCG00006013
length 751
RNA type mRNA
GC content 0.50
exon number 5
gene id AMCG00006013
representative False

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14336891 ~ 14341603 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGCGGCGAGCGGAGCCGCAGTGAGGAGGCCGTGCTCCAGCCCGGCCCCCAGTGTGACCCGCCGCGCATTGACACGCCAGGGGTGTTAGTGTTACTGCACTTTGACAGAGCCTCCACACACCGCAGGACACTGATCAACAGCAAATACAACATGCCGCTCGCGATGGACCTGATGCACCCCTCCTATGAGGCGGAGAGGAGGAGGCACAAGAAGAAGAGGCTGGCTGCTACAGGATCACAACTGTCTTCAGCCACGCGCACAGAGTGGTCCCGTGTGCCGGCTGCTCCTACGTCCTGTGCCAACCCAAAGGAGGGAAGTGCCGCCTCACTGAAGGctgctctttcagaagaaaacaacactgaGCCATTCTAATCCCACACTTCTACCGGAAGATCTGTCCATTTCTCTGCCTGCGTCTCTACTTGGGGCAGTCGCCACTGGCCAGGCTTGATCGACACAAAGGCGATGattcagaaaagaaaagggtgaaaaaatgaataaaaaggaaATCAGTGAGTTGGGGAGGTGGTTCTGAATGAAGACTGATTTTACTGCGAATTGTATGGATCTGTGATTGCACTATGCACAAGAACGCACTCCGTAAAATTCTTCTCTCTACAACTTGAAATGCTCCCAAGGCATTTTTGAGTAGTGTCATGGGATTGTTAATGGGGAACATATCTTGCATTTGCACTTTCTGTATCTAAACATCTTAATAAACTTAATAAAGGCTCAGTTTTAAACTCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU196137 lncRNA downstream 13827 14318979 ~ 14323114 (-) True G155703
TU196134 lncRNA downstream 31244 14300475 ~ 14305697 (-) True G155701
TU196135 lncRNA downstream 31244 14300475 ~ 14305697 (-) False G155701
TU196075 lncRNA downstream 170537 14166179 ~ 14166404 (-) True G155655
TU196072 lncRNA downstream 244484 14089336 ~ 14092457 (-) True G155652
TU196154 lncRNA upstream 28158 14369761 ~ 14370182 (-) True G155717
TU196199 lncRNA upstream 80901 14422504 ~ 14424746 (-) True G155754
TU196218 lncRNA upstream 147687 14489290 ~ 14491929 (-) True G155768
TU196235 lncRNA upstream 227959 14569562 ~ 14569836 (-) True G155783
TU196367 lncRNA upstream 638781 14980384 ~ 14981621 (-) True G155899
AMCG00006014 mRNA downstream 64932 14264388 ~ 14272009 (-) True AMCG00006014
AMCG00006012 mRNA downstream 80203 14249791 ~ 14256738 (-) True AMCG00006012
AMCG00005996 mRNA downstream 138027 14187248 ~ 14198914 (-) True AMCG00005996
AMCG00005998 mRNA downstream 157821 14173845 ~ 14179120 (-) True AMCG00005998
AMCG00005997 mRNA downstream 165376 14159131 ~ 14171565 (-) True AMCG00005997
AMCG00006015 mRNA upstream 28806 14370409 ~ 14374943 (-) True AMCG00006015
AMCG00006028 mRNA upstream 42067 14383670 ~ 14391108 (-) True AMCG00006028
AMCG00006029 mRNA upstream 51851 14393454 ~ 14401173 (-) True AMCG00006029
AMCG00006027 mRNA upstream 100307 14441910 ~ 14445493 (-) True AMCG00006027
AMCG00006026 mRNA upstream 111415 14453018 ~ 14458341 (-) True AMCG00006026
TU196074 other downstream 165334 14168090 ~ 14171607 (-) False AMCG00005997
TU195614 other downstream 1482138 12843778 ~ 12854803 (-) False AMCG00006063
TU195574 other downstream 1664483 12671652 ~ 12672458 (-) False AMCG00005989
TU195020 other downstream 2982308 11349245 ~ 11354633 (-) False AMCG00005879
TU195016 other downstream 2997827 11336774 ~ 11339114 (-) False AMCG00005877
TU196220 other upstream 167630 14509233 ~ 14509614 (-) True G155770
TU196273 other upstream 338194 14679797 ~ 14682961 (-) True AMCG00006037
TU196327 other upstream 441028 14782631 ~ 14784006 (-) False AMCG00006043
TU196602 other upstream 1091829 15433432 ~ 15436866 (-) True G156088
TU196604 other upstream 1147799 15489402 ~ 15491642 (-) False G156088