RNA id: AMCG00006020


Basic Information

Item Value
RNA id AMCG00006020
length 291
RNA type mRNA
GC content 0.48
exon number 2
gene id AMCG00006020
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14546180 ~ 14546493 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTATCCAGCCTTAACAAACAGGAAATCAACAGAAGAGACACGTTTGTGCTGAATGGGTTCTTGGAGTGCCAGGAGTGGCAGACGCCCAACACTGCCACCTTCCTTTCAGAACCTCTCTGTGCAGGACATCAGTCTTCCCACTTCAGTTACTGCCGGGACACACAGTGGGACGGTACTCTTTACACAGTGTCAAAGGCGGAGTTCTTAAACTACTATGCCGGAGTCAGTGCTTCCATCAACAGTGATGCCTATTTTATGTTGTGTATGAAGTACAGCTGGGGACTATga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU196218 lncRNA downstream 54251 14489290 ~ 14491929 (-) True G155768
TU196199 lncRNA downstream 121434 14422504 ~ 14424746 (-) True G155754
TU196154 lncRNA downstream 175998 14369761 ~ 14370182 (-) True G155717
TU196137 lncRNA downstream 223066 14318979 ~ 14323114 (-) True G155703
TU196135 lncRNA downstream 240483 14300475 ~ 14305697 (-) False G155701
TU196235 lncRNA upstream 23069 14569562 ~ 14569836 (-) True G155783
TU196367 lncRNA upstream 433891 14980384 ~ 14981621 (-) True G155899
TU196366 lncRNA upstream 434610 14981103 ~ 14981621 (-) False G155899
TU196378 lncRNA upstream 455917 15002410 ~ 15004191 (-) False AMCG00006102
TU196434 lncRNA upstream 553816 15100309 ~ 15105533 (-) True G155957
AMCG00006018 mRNA downstream 38792 14492005 ~ 14507388 (-) True AMCG00006018
AMCG00006026 mRNA downstream 87839 14453018 ~ 14458341 (-) True AMCG00006026
AMCG00006027 mRNA downstream 100687 14441910 ~ 14445493 (-) True AMCG00006027
AMCG00006029 mRNA downstream 145007 14393454 ~ 14401173 (-) True AMCG00006029
AMCG00006028 mRNA downstream 155072 14383670 ~ 14391108 (-) True AMCG00006028
AMCG00006019 mRNA upstream 451 14546944 ~ 14549687 (-) True AMCG00006019
AMCG00006035 mRNA upstream 42878 14589371 ~ 14593370 (-) True AMCG00006035
AMCG00006039 mRNA upstream 101096 14647589 ~ 14651753 (-) True AMCG00006039
AMCG00006036 mRNA upstream 114092 14660585 ~ 14662509 (-) True AMCG00006036
AMCG00006038 mRNA upstream 117065 14663558 ~ 14670355 (-) True AMCG00006038
TU196220 other downstream 36566 14509233 ~ 14509614 (-) True G155770
TU196147 other downstream 205517 14336891 ~ 14340663 (-) True AMCG00006013
TU196074 other downstream 374573 14168090 ~ 14171607 (-) False AMCG00005997
TU195614 other downstream 1691377 12843778 ~ 12854803 (-) False AMCG00006063
TU195574 other downstream 1873722 12671652 ~ 12672458 (-) False AMCG00005989
TU196273 other upstream 133304 14679797 ~ 14682961 (-) True AMCG00006037
TU196327 other upstream 236138 14782631 ~ 14784006 (-) False AMCG00006043
TU196602 other upstream 886939 15433432 ~ 15436866 (-) True G156088
TU196604 other upstream 942909 15489402 ~ 15491642 (-) False G156088
TU196760 other upstream 1407583 15954076 ~ 15957090 (-) True G156206

Expression Profile