RNA id: AMCG00006151


Basic Information

Item Value
RNA id AMCG00006151
length 277
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00006151
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17095682 ~ 17101861 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GACACAGGAAAAACAAGTGTGTCACTCATTTTCTACTTCCTATAAAAGCCGCTCTACCGTCCTCCCACGGTCTAATGTGGCCAAGGAGTCGAAAATGGCTGGAGAGGAAGCTTTGAAGCCCCTGATGTTTCTGCTACTGTACATGCTCATGAAACGGAGAACCGATATTAACAATGCCAATGTTCAAAGAAGGAACGAAATACAGAGGCGAATCAGGCACAGACAGTACTTCTTTCAGCGGCAGAGGAGGATGCTTATGGTTACAGTTAAGCTATAG

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU196904 lncRNA upstream 450833 16644447 ~ 16644849 (+) True G156329
TU196901 lncRNA upstream 467969 16625558 ~ 16627713 (+) True G156326
TU196896 lncRNA upstream 495824 16599532 ~ 16599858 (+) True G156321
TU196875 lncRNA upstream 590476 16504770 ~ 16505206 (+) True G156302
TU196847 lncRNA upstream 628006 16464008 ~ 16467676 (+) True G156279
TU197030 lncRNA downstream 57716 17159577 ~ 17171780 (+) True G156430
TU197041 lncRNA downstream 230675 17332536 ~ 17342156 (+) True G156440
TU197127 lncRNA downstream 421373 17523234 ~ 17524750 (+) True G156506
TU197131 lncRNA downstream 433770 17535631 ~ 17547361 (+) True G156509
TU197144 lncRNA downstream 465698 17567559 ~ 17571532 (+) True G156521
AMCG00006130 mRNA upstream 19418 17070040 ~ 17076264 (+) True AMCG00006130
AMCG00006125 mRNA upstream 177702 16908516 ~ 16917980 (+) True AMCG00006125
AMCG00006143 mRNA upstream 364451 16723292 ~ 16731231 (+) True AMCG00006143
AMCG00006142 mRNA upstream 373322 16707608 ~ 16722360 (+) True AMCG00006142
AMCG00006148 mRNA upstream 398809 16691581 ~ 16696873 (+) True AMCG00006148
AMCG00006150 mRNA downstream 2476 17104337 ~ 17121505 (+) True AMCG00006150
AMCG00006149 mRNA downstream 21387 17123248 ~ 17127633 (+) True AMCG00006149
AMCG00006136 mRNA downstream 410041 17511902 ~ 17518833 (+) True AMCG00006136
AMCG00006188 mRNA downstream 598118 17699979 ~ 17735084 (+) True AMCG00006188
AMCG00006190 mRNA downstream 644272 17746133 ~ 17762467 (+) False AMCG00006190
TU196902 other upstream 466500 16627793 ~ 16629182 (+) True G156327
TU196796 other upstream 951059 16140544 ~ 16144623 (+) False AMCG00006089
TU196781 other upstream 1035852 16054035 ~ 16059830 (+) False AMCG00006113
TU196746 other upstream 1122676 15964433 ~ 15973006 (+) False AMCG00006107
TU196591 other upstream 1510921 15578084 ~ 15584761 (+) True AMCG00006065
TU197026 other downstream 21344 17123205 ~ 17127554 (+) False AMCG00006149
TU197282 other downstream 871880 17973741 ~ 17980637 (+) False G156640
TU197332 other downstream 1088363 18190224 ~ 18356589 (+) True AMCG00006138
TU197362 other downstream 1376267 18478128 ~ 18480087 (+) True AMCG00006174

Expression Profile