RNA id: AMCG00006193


Basic Information

Item Value
RNA id AMCG00006193
length 339
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00006193
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19984679 ~ 19988411 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCACCCCGATTCACCAAGGTACCAGTGGACCAGATTGGCGTGTCAGGAGGGGTGGTCTCCTTCGTGTGCCAGGCTACAGGTGATCCTAAGCCTCATGTGGCCTGGAACAAGAAAGGGAAGAGGGTCAACTCCCAGCGAATTGAGATGATCGAGTTTGACGAGGGGGCAGGGGCGGTGCTGCGAATACAGCCCCTCCGAGCGCCACGCGACGAGAATATTTATGAGTGTGTCGCGGAGAACTCGGAAGGGGAAGTGACGGTCACTGCCAAACTATCCATCATCAGAGGTAAGGTGAAGCTGAGCGAACTGCAGTTTGCATGGTGGTTTCCAATGTCATTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU197693 lncRNA downstream 179508 19804948 ~ 19805171 (-) True G156979
TU197685 lncRNA downstream 267000 19717173 ~ 19717679 (-) True G156971
TU197659 lncRNA downstream 494838 19485550 ~ 19489841 (-) True G156947
TU197658 lncRNA downstream 504242 19479468 ~ 19480437 (-) True G156946
TU197651 lncRNA downstream 524474 19455389 ~ 19460205 (-) True AMCG00006201
TU197745 lncRNA upstream 240175 20228586 ~ 20229103 (-) True G157011
TU197754 lncRNA upstream 366052 20354463 ~ 20354668 (-) True G157020
TU197764 lncRNA upstream 378178 20366589 ~ 20366830 (-) True G157030
TU197772 lncRNA upstream 430563 20418974 ~ 20419284 (-) True G157038
TU197776 lncRNA upstream 462061 20450472 ~ 20486674 (-) True G157042
AMCG00006194 mRNA downstream 62208 19895425 ~ 19922471 (-) True AMCG00006194
AMCG00006197 mRNA downstream 102762 19880050 ~ 19881917 (-) True AMCG00006197
AMCG00006196 mRNA downstream 109748 19871892 ~ 19874931 (-) True AMCG00006196
AMCG00006195 mRNA downstream 125310 19824825 ~ 19859369 (-) True AMCG00006195
AMCG00006201 mRNA downstream 521474 19454636 ~ 19463205 (-) False AMCG00006201
TU197648 other downstream 532818 19448931 ~ 19451861 (-) False AMCG00006201
TU197609 other downstream 690859 19275200 ~ 19293820 (-) True G156907
TU196984 other downstream 3034562 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 3313292 16669801 ~ 16671387 (-) False G156341
TU196884 other downstream 3466568 16505593 ~ 16518111 (-) False AMCG00006118
TU197805 other upstream 721388 20709799 ~ 20712216 (-) True G157059

Expression Profile