RNA id: TU191240


Basic Information

Item Value
RNA id TU191240
length 467
lncRNA type inter_gene
GC content 0.59
exon number 2
gene id G151901
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 31994 ~ 32811 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAACAGGTCGGGCAGCGGGGACGTCGCCGGCGCAGGCGCGCTGCAGTGGGCTCAGTGAGGGACTCGCACCGGTCGCATCAGCTCCTCTCTGCACGCCTGTGCTCTCCAGAGGCGAGCCCGTGCAGTGTGCGTGTGGAGAGCCGTGTCCACTCCACGCACAGCAACACGTCTGCGgagggTTTGTGTTGTTCCTGTTTCTTTGCTGCTGTAAACTCCGGGCTGCTCCATAAGGAATATAATGGCCGGCGCTGTGTTTCCAGGAGGACTGGACCTTGGCAAGGCTCTATCCCAACCCACCTCTGGAGAGATGAGGGTTGGGCAATGGCTCTGTGCCCCTGAGGCTGAGGGGGGACGAgagtaagtatttattttatttattttgactgacCTGACTGTAGAAGGGGAGGTCATTCTGTGTCCATGGTTAGGGGTGTGGGCTTGTAGGGCAGGAAGGGAAGTGGTGCCTG

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191229 lncRNA downstream 11438 20300 ~ 20556 (-) True G151891
TU191242 lncRNA upstream 2911 35722 ~ 36395 (-) True G151903
TU191281 lncRNA upstream 62310 95121 ~ 99670 (-) False AMCG00005399
TU191282 lncRNA upstream 62310 95121 ~ 99670 (-) False AMCG00005399
TU191313 lncRNA upstream 75587 108398 ~ 112412 (-) True AMCG00005400
TU191322 lncRNA upstream 209343 242154 ~ 332344 (-) True G151957
AMCG00005405 mRNA upstream 5769 38580 ~ 41030 (-) True AMCG00005405
AMCG00005409 mRNA upstream 8409 41220 ~ 42273 (-) True AMCG00005409
AMCG00005408 mRNA upstream 9818 42629 ~ 53419 (-) True AMCG00005408
AMCG00005406 mRNA upstream 21397 54208 ~ 61323 (-) True AMCG00005406
AMCG00005407 mRNA upstream 29544 62355 ~ 67033 (-) True AMCG00005407
TU191268 other upstream 29810 62621 ~ 63728 (-) False AMCG00005407
TU191269 other upstream 29810 62621 ~ 63728 (-) False AMCG00005407
TU191554 other upstream 1186516 1219327 ~ 1258926 (-) False G152133
TU191607 other upstream 1338572 1371383 ~ 1371737 (-) False AMCG00005419
TU191743 other upstream 1473129 1505940 ~ 1507628 (-) True G152277

Expression Profile