RNA id: TU191242


Basic Information

Item Value
RNA id TU191242
length 674
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G151903
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 35722 ~ 36395 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

NNAAGAGCTGTGTtctcagtgtgttgtgttggtcTCTGTCGACAGCCCTGTGTGGCTGCCATTAATGTATTACACCAGTTATATATTGTGgtgtatagaatatatatacacaaactcTTTATGACAGAAGTTGTATATATGTTCATATCTtatgtagtattttaaaattgtgtgtatgtatataaaaagtaGTCTATATGTAGACATTACATCCATGTTATATATGTACTGCTGTATTGTGTATATAGATACACAACAGTGTAGTATTAGTAAAGCTAGAAATTCCTCTTCACGTATACTTAAGAGAGGTAAGAACAAGTCAACAGTCAGTCCAGAAGGTAGTTTGTCATTTAtgatgagcatcttggagacaatgcCAAACAgtgtctgctccctaatcctTGTATTGACCTGTGAAGTCTGTCctctaatgatatatattctgcttagtgAGCTTTCAAGATGACATGctaattataaccagatctttgacttcGTGTATCaaaagctctgacttttagCATGGAGTCAGAGGAACTCTGGAATGTCCTTGATGCACTGTTCCTCTCTACATCACATGTGATAAAGGCACTGCAATGAACGCTCCAATCTGACTGAAGACTGAGTTTGTGCCACATTACCATTATATACACTAGCATAGTATTGTTATAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191240 lncRNA downstream 2911 31994 ~ 32811 (-) True G151901
TU191229 lncRNA downstream 15166 20300 ~ 20556 (-) True G151891
TU191281 lncRNA upstream 58726 95121 ~ 99670 (-) False AMCG00005399
TU191282 lncRNA upstream 58726 95121 ~ 99670 (-) False AMCG00005399
TU191313 lncRNA upstream 72003 108398 ~ 112412 (-) True AMCG00005400
TU191322 lncRNA upstream 205759 242154 ~ 332344 (-) True G151957
TU191337 lncRNA upstream 310602 346997 ~ 350322 (-) True G151970
AMCG00005405 mRNA upstream 2185 38580 ~ 41030 (-) True AMCG00005405
AMCG00005409 mRNA upstream 4825 41220 ~ 42273 (-) True AMCG00005409
AMCG00005408 mRNA upstream 6234 42629 ~ 53419 (-) True AMCG00005408
AMCG00005406 mRNA upstream 17813 54208 ~ 61323 (-) True AMCG00005406
AMCG00005407 mRNA upstream 25960 62355 ~ 67033 (-) True AMCG00005407
TU191268 other upstream 26226 62621 ~ 63728 (-) False AMCG00005407
TU191269 other upstream 26226 62621 ~ 63728 (-) False AMCG00005407
TU191554 other upstream 1182932 1219327 ~ 1258926 (-) False G152133
TU191607 other upstream 1334988 1371383 ~ 1371737 (-) False AMCG00005419
TU191743 other upstream 1469545 1505940 ~ 1507628 (-) True G152277

Expression Profile