RNA id: TU191451



Basic Information


Item Value
RNA id TU191451
length 211
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G152053
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1057185 ~ 1057395 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcaaaatattaaaaacatcaaaacaccTTAAAACAAGATAACAATCACATCAAAACATTCCTGGGCAATACAACAcatacaatcaatacataacAGATAACATCAGCATGGccatcataaatcataaatataaatacaatcaagATGAAAAGGGCCACAATCCACAATCGATTGATACAGGTAACCAATGACACAAAATACGTGGACAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191435 lncRNA upstream 42805 1014078 ~ 1014380 (+) True G152040
TU191346 lncRNA upstream 366249 690659 ~ 690936 (+) True G151978
TU191335 lncRNA upstream 520493 535895 ~ 536692 (+) True G151968
TU191331 lncRNA upstream 696893 360093 ~ 360292 (+) True G151964
TU191330 lncRNA upstream 701325 355581 ~ 355860 (+) True G151963
TU191523 lncRNA downstream 187636 1245031 ~ 1253959 (+) True G152111
TU191630 lncRNA downstream 400759 1458154 ~ 1458747 (+) True G152196
TU191632 lncRNA downstream 404329 1461724 ~ 1461939 (+) True G152198
TU191670 lncRNA downstream 452107 1509502 ~ 1515952 (+) False AMCG00005434
TU191834 lncRNA downstream 872060 1929455 ~ 1946800 (+) False AMCG00005429
AMCG00005465 mRNA upstream 21154 1030879 ~ 1036031 (+) True AMCG00005465
AMCG00005467 mRNA upstream 26686 1027198 ~ 1030499 (+) True AMCG00005467
AMCG00005463 mRNA upstream 43792 1004963 ~ 1013393 (+) True AMCG00005463
AMCG00005469 mRNA upstream 58351 988627 ~ 998834 (+) True AMCG00005469
AMCG00005470 mRNA upstream 69478 987348 ~ 987707 (+) True AMCG00005470
AMCG00005466 mRNA downstream 6095 1063490 ~ 1072241 (+) True AMCG00005466
AMCG00005464 mRNA downstream 15657 1073052 ~ 1081418 (+) True AMCG00005464
AMCG00005390 mRNA downstream 25763 1083158 ~ 1090681 (+) True AMCG00005390
AMCG00005410 mRNA downstream 156762 1214157 ~ 1244875 (+) True AMCG00005410
AMCG00005411 mRNA downstream 197647 1255042 ~ 1258125 (+) True AMCG00005411
TU191336 other upstream 519822 536751 ~ 537363 (+) True G151969
TU191334 other upstream 657320 398925 ~ 399865 (+) True G151967
TU191585 other downstream 309619 1367014 ~ 1367956 (+) True G152159
TU191589 other downstream 319073 1376468 ~ 1379302 (+) True AMCG00005418
TU191729 other downstream 688565 1745960 ~ 1748934 (+) True G152267
TU191823 other downstream 742416 1799811 ~ 1803903 (+) True G152337
TU192049 other downstream 1446515 2503910 ~ 2510676 (+) True AMCG00005481

Expression Profile