Item | Value |
---|---|
RNA id | TU191585 |
length | 489 |
RNA type | TUCP |
GC content | 0.53 |
exon number | 3 |
gene id | G152159 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030142.1 |
NCBI id | CM030142.1 |
chromosome length | 21087710 |
location | 1367014 ~ 1367956 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0006508 | proteolysis | biological_process |
id | description |
---|---|
ko04612 | Antigen processing and presentation |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU191523 | lncRNA | upstream | 113055 | 1245031 ~ 1253959 (+) | True | G152111 |
TU191451 | lncRNA | upstream | 309619 | 1057185 ~ 1057395 (+) | True | G152053 |
TU191435 | lncRNA | upstream | 352634 | 1014078 ~ 1014380 (+) | True | G152040 |
TU191346 | lncRNA | upstream | 676078 | 690659 ~ 690936 (+) | True | G151978 |
TU191335 | lncRNA | upstream | 830322 | 535895 ~ 536692 (+) | True | G151968 |
TU191630 | lncRNA | downstream | 90198 | 1458154 ~ 1458747 (+) | True | G152196 |
TU191632 | lncRNA | downstream | 93768 | 1461724 ~ 1461939 (+) | True | G152198 |
TU191670 | lncRNA | downstream | 141546 | 1509502 ~ 1515952 (+) | False | AMCG00005434 |
TU191834 | lncRNA | downstream | 561499 | 1929455 ~ 1946800 (+) | False | AMCG00005429 |
TU191902 | lncRNA | downstream | 887409 | 2255365 ~ 2323345 (+) | True | G152397 |
AMCG00005416 | mRNA | upstream | 7491 | 1342760 ~ 1359523 (+) | True | AMCG00005416 |
AMCG00005412 | mRNA | upstream | 44419 | 1321808 ~ 1322595 (+) | True | AMCG00005412 |
AMCG00005414 | mRNA | upstream | 61942 | 1301037 ~ 1305072 (+) | True | AMCG00005414 |
AMCG00005415 | mRNA | upstream | 71566 | 1284287 ~ 1295448 (+) | True | AMCG00005415 |
AMCG00005411 | mRNA | upstream | 108889 | 1255042 ~ 1258125 (+) | True | AMCG00005411 |
AMCG00005418 | mRNA | downstream | 8820 | 1376776 ~ 1378884 (+) | False | AMCG00005418 |
AMCG00005413 | mRNA | downstream | 13785 | 1381741 ~ 1384590 (+) | True | AMCG00005413 |
AMCG00005424 | mRNA | downstream | 20732 | 1388688 ~ 1402701 (+) | True | AMCG00005424 |
AMCG00005425 | mRNA | downstream | 35090 | 1403046 ~ 1406537 (+) | True | AMCG00005425 |
AMCG00005422 | mRNA | downstream | 40477 | 1408433 ~ 1425336 (+) | True | AMCG00005422 |
TU191336 | other | upstream | 829651 | 536751 ~ 537363 (+) | True | G151969 |
TU191334 | other | upstream | 967149 | 398925 ~ 399865 (+) | True | G151967 |
TU191589 | other | downstream | 8512 | 1376468 ~ 1379302 (+) | True | AMCG00005418 |
TU191729 | other | downstream | 378004 | 1745960 ~ 1748934 (+) | True | G152267 |
TU191823 | other | downstream | 431855 | 1799811 ~ 1803903 (+) | True | G152337 |
TU192049 | other | downstream | 1135954 | 2503910 ~ 2510676 (+) | True | AMCG00005481 |
TU192048 | other | downstream | 1136037 | 2503993 ~ 2510676 (+) | False | AMCG00005481 |