RNA id: TU191799


Basic Information

Item Value
RNA id TU191799
length 374
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G152320
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1692749 ~ 1693555 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTAGTGTCTCACCTCCAGCCTGCTCACCGTCTCCTCGTTCCCCACAATGTCGCACAGTTTCAGGGGTCTGTACTTCTCCACCCAGGGCAGGTCGTAGCCCGGGCTAGAGCCCTTTCCAGTCGCCGGCTCCGGCTTGGCCTGGGTCTCTCCCGTTCGGACCTGCTCGGTGTCGTCTGTTTTCATCTCCACCTCCATGGTGCCGTATTTCCACAACagtctctgcttctctctccccccgAAACTGCAGTCCGCTCGGATCTTCCCGCCACGGCCAGGACCCAGACAGCGTGCGGCGCGGTGACGTCAGACGCAGGGGGCGGGTCTCACTGTTGAAATTCTGACTTACCTGTGATCAGTCCTAGAGATGAGGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191737 lncRNA downstream 77252 1567118 ~ 1615497 (-) True G152271
TU191735 lncRNA downstream 122571 1521742 ~ 1570178 (-) False G152271
TU191631 lncRNA downstream 234087 1458237 ~ 1458662 (-) True G152197
TU191612 lncRNA downstream 294357 1397341 ~ 1398392 (-) True G152178
TU191552 lncRNA downstream 357309 1257297 ~ 1335440 (-) False G152133
TU191821 lncRNA upstream 52398 1745953 ~ 1752738 (-) True G152335
TU191837 lncRNA upstream 247468 1941023 ~ 1946800 (-) True G152344
TU191933 lncRNA upstream 474049 2167604 ~ 2175954 (-) True G152424
TU191973 lncRNA upstream 601278 2294833 ~ 2300752 (-) False G152452
TU191974 lncRNA upstream 601278 2294833 ~ 2318672 (-) True G152452
AMCG00005447 mRNA downstream 7289 1675244 ~ 1685460 (-) True AMCG00005447
AMCG00005446 mRNA downstream 26384 1660027 ~ 1666365 (-) True AMCG00005446
AMCG00005445 mRNA downstream 55253 1635745 ~ 1637496 (-) True AMCG00005445
AMCG00005438 mRNA downstream 117993 1570753 ~ 1574756 (-) True AMCG00005438
AMCG00005439 mRNA downstream 155881 1523660 ~ 1536868 (-) True AMCG00005439
AMCG00005460 mRNA upstream 3722 1697277 ~ 1707786 (-) True AMCG00005460
AMCG00005461 mRNA upstream 15132 1708687 ~ 1723500 (-) False AMCG00005461
AMCG00005462 mRNA upstream 61358 1754913 ~ 1774451 (-) True AMCG00005462
AMCG00005420 mRNA upstream 109362 1802917 ~ 1808080 (-) True AMCG00005420
AMCG00005421 mRNA upstream 146012 1839567 ~ 1857205 (-) True AMCG00005421
TU191734 other downstream 77252 1612773 ~ 1615497 (-) False G152271
TU191743 other downstream 185121 1505940 ~ 1507628 (-) True G152277
TU191607 other downstream 321012 1371383 ~ 1371737 (-) False AMCG00005419
TU191554 other downstream 433823 1219327 ~ 1258926 (-) False G152133
TU191268 other downstream 1629021 62621 ~ 63728 (-) False AMCG00005407
TU191793 other upstream 15128 1708683 ~ 1721202 (-) True AMCG00005461
TU191946 other upstream 503799 2197354 ~ 2329684 (-) False AMCG00005532
TU192197 other upstream 1181731 2875286 ~ 2876009 (-) False AMCG00005491
TU192222 other upstream 1378305 3071860 ~ 3090714 (-) False G152645
TU192573 other upstream 2595110 4288665 ~ 4289892 (-) False AMCG00005539

Expression Profile