RNA id: TU193274


Basic Information

Item Value
RNA id TU193274
length 515
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G153487
representative False

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6560939 ~ 6563570 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTAAACAAAACAGAGCCGGCTCATACGTCATCAGCGCACACCACTCACACGGCAGAAAAACAACCTCAGTGTCCAATCACAGAGCAGGGAGGCGGGACCAACTGCCTCAGCCTTCTCGAATTTTCCAGACATTTCTCATGTCGACTAGAGATATGAGTCcgcggtttttattttaacacaattatgaaaaacaaatccacaccATGAATCGAAAACGCGTCTGCGCATGACCATAGTGATTCTGGGCACGAATATGATTATTGGTAAAAATAGAATATAGGTTTTAAAAACGCGCACTACTTTTCACTGCGGATGAATATGGTTGTGATGGCACTGCAACGTCATGACGCTGTGTTTGTATAAAACAGGTTCACCGGGGACGTACAGCAGAGTCTGAAGACATTCAGAGAACCGCTTTTATATCAAGATTTAGATTTTGACGGCTACCGAAACtATTGAAAGATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU193131 lncRNA downstream 305004 6240402 ~ 6257172 (-) True G153379
TU193126 lncRNA downstream 326767 6235183 ~ 6235409 (-) True G153375
TU193125 lncRNA downstream 327318 6234548 ~ 6234858 (-) True G153374
TU193124 lncRNA downstream 327817 6234128 ~ 6234359 (-) True G153373
TU193123 lncRNA downstream 328148 6232166 ~ 6234028 (-) True AMCG00005628
TU193332 lncRNA upstream 83746 6647316 ~ 6662496 (-) True G153514
TU193418 lncRNA upstream 371860 6935430 ~ 6935676 (-) True G153586
TU193473 lncRNA upstream 489235 7052805 ~ 7053559 (-) True G153638
TU193483 lncRNA upstream 575610 7139180 ~ 7139794 (-) False AMCG00005685
TU193533 lncRNA upstream 616058 7179628 ~ 7202286 (-) True G153678
AMCG00005672 mRNA downstream 16296 6528567 ~ 6545880 (-) True AMCG00005672
AMCG00005671 mRNA downstream 34556 6502453 ~ 6527620 (-) True AMCG00005671
AMCG00005675 mRNA downstream 64515 6497360 ~ 6497661 (-) True AMCG00005675
AMCG00005674 mRNA downstream 70861 6490908 ~ 6491315 (-) False AMCG00005674
AMCG00005673 mRNA downstream 75926 6481066 ~ 6486250 (-) True AMCG00005673
AMCG00005665 mRNA upstream 7487 6571057 ~ 6575631 (-) True AMCG00005665
AMCG00005664 mRNA upstream 19129 6582699 ~ 6594894 (-) True AMCG00005664
AMCG00005644 mRNA upstream 126881 6690451 ~ 6704360 (-) True AMCG00005644
AMCG00005646 mRNA upstream 143088 6706658 ~ 6711986 (-) True AMCG00005646
AMCG00005645 mRNA upstream 159377 6722947 ~ 6743221 (-) True AMCG00005645
TU193235 other downstream 65605 6490255 ~ 6496571 (-) True AMCG00005674
TU193087 other downstream 479310 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 1259978 5300769 ~ 5302198 (-) True G153130
TU192573 other downstream 2272284 4288665 ~ 4289892 (-) False AMCG00005539
TU192222 other downstream 3471462 3071860 ~ 3090714 (-) False G152645
TU193605 other upstream 1221984 7785554 ~ 7788321 (-) True G153733
TU193670 other upstream 1435766 7999336 ~ 8001340 (-) False AMCG00005704
TU193709 other upstream 1528178 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 2526852 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 2861720 9425290 ~ 9434940 (-) True G154250

Expression Profile