RNA id: TU193539



Basic Information


Item Value
RNA id TU193539
length 262
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G153681
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7278504 ~ 7278765 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGAATCACATTCTAAAATTTGCTACTCAGTAATGaatgaattgtattaattattaacatatGCAAATATCagggacacagatggaaattgggtttcaaggcagtcaagacagaaaacaggagacacttcttcacaaagagaggtgtcacaatctgaacaaactccccagcaatgtggtagaagagacaatttgggaacattcaaaaatagactggataggatccttggatcactaagttattaatggataccaaatgagca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193533 lncRNA downstream 76218 7179628 ~ 7202286 (-) True G153678
TU193483 lncRNA downstream 138710 7139180 ~ 7139794 (-) False AMCG00005685
TU193473 lncRNA downstream 224945 7052805 ~ 7053559 (-) True G153638
TU193418 lncRNA downstream 342828 6935430 ~ 6935676 (-) True G153586
TU193332 lncRNA downstream 616008 6647316 ~ 6662496 (-) True G153514
TU193615 lncRNA upstream 596022 7874787 ~ 7875042 (-) True G153742
TU193660 lncRNA upstream 703265 7982030 ~ 7983931 (-) True G153778
TU193663 lncRNA upstream 705475 7984240 ~ 8021640 (-) True G153779
TU193946 lncRNA upstream 1295427 8574192 ~ 8588222 (-) True G153980
TU193982 lncRNA upstream 1451038 8729803 ~ 8730149 (-) True G154010
AMCG00005688 mRNA downstream 2024 7243950 ~ 7276480 (-) True AMCG00005688
AMCG00005687 mRNA downstream 45629 7229906 ~ 7232875 (-) True AMCG00005687
AMCG00005689 mRNA downstream 62861 7215353 ~ 7215643 (-) True AMCG00005689
AMCG00005683 mRNA downstream 109115 7157197 ~ 7169389 (-) True AMCG00005683
AMCG00005685 mRNA downstream 132697 7109218 ~ 7145807 (-) True AMCG00005685
AMCG00005659 mRNA upstream 2855 7281620 ~ 7292372 (-) True AMCG00005659
AMCG00005698 mRNA upstream 188926 7467691 ~ 7468500 (-) True AMCG00005698
AMCG00005691 mRNA upstream 542429 7821194 ~ 7828552 (-) True AMCG00005691
AMCG00005692 mRNA upstream 573901 7852666 ~ 7869220 (-) True AMCG00005692
AMCG00005718 mRNA upstream 617581 7896346 ~ 7901372 (-) True AMCG00005718
TU193235 other downstream 781933 6490255 ~ 6496571 (-) True AMCG00005674
TU193087 other downstream 1195638 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 1976306 5300769 ~ 5302198 (-) True G153130
TU192573 other downstream 2988612 4288665 ~ 4289892 (-) False AMCG00005539
TU192222 other downstream 4187790 3071860 ~ 3090714 (-) False G152645
TU193605 other upstream 506789 7785554 ~ 7788321 (-) True G153733
TU193670 other upstream 720571 7999336 ~ 8001340 (-) False AMCG00005704
TU193709 other upstream 812983 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 1811657 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 2146525 9425290 ~ 9434940 (-) True G154250

Expression Profile