RNA id: TU193615



Basic Information


Item Value
RNA id TU193615
length 256
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G153742
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7874787 ~ 7875042 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTTAATCAGGGTCACAATGCCGATCTGTACACTGTCAGTATGTCAGAAAGAAACATCACATAAAAGTCACATAAACCTGaagcactgaaaataaaacctccTTCTATAAGCATCACAACTTTGTGGACTAACAACATATTCCAGCAGCACAATGTGTTCAGTGTCATTAGAGAATATCGTGCATCGTTACATACTCTGACTTGGATCTTTCTCTTAAGAAAGTTTCCGCCCCAGTGCTGCTTTCACTtatgcaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193539 lncRNA downstream 596022 7278504 ~ 7278765 (-) True G153681
TU193533 lncRNA downstream 672501 7179628 ~ 7202286 (-) True G153678
TU193483 lncRNA downstream 734993 7139180 ~ 7139794 (-) False AMCG00005685
TU193473 lncRNA downstream 821228 7052805 ~ 7053559 (-) True G153638
TU193418 lncRNA downstream 939111 6935430 ~ 6935676 (-) True G153586
TU193660 lncRNA upstream 106988 7982030 ~ 7983931 (-) True G153778
TU193663 lncRNA upstream 109198 7984240 ~ 8021640 (-) True G153779
TU193946 lncRNA upstream 699150 8574192 ~ 8588222 (-) True G153980
TU193982 lncRNA upstream 854761 8729803 ~ 8730149 (-) True G154010
TU194132 lncRNA upstream 1112239 8987281 ~ 9024879 (-) True G154126
AMCG00005692 mRNA downstream 5567 7852666 ~ 7869220 (-) True AMCG00005692
AMCG00005691 mRNA downstream 46235 7821194 ~ 7828552 (-) True AMCG00005691
AMCG00005698 mRNA downstream 406287 7467691 ~ 7468500 (-) True AMCG00005698
AMCG00005659 mRNA downstream 582415 7281620 ~ 7292372 (-) True AMCG00005659
AMCG00005688 mRNA downstream 598307 7243950 ~ 7276480 (-) True AMCG00005688
AMCG00005718 mRNA upstream 21304 7896346 ~ 7901372 (-) True AMCG00005718
AMCG00005715 mRNA upstream 43637 7918679 ~ 7950134 (-) True AMCG00005715
AMCG00005716 mRNA upstream 79089 7954131 ~ 7966260 (-) True AMCG00005716
AMCG00005717 mRNA upstream 101016 7976058 ~ 7977780 (-) True AMCG00005717
AMCG00005702 mRNA upstream 114314 7989356 ~ 7999100 (-) True AMCG00005702
TU193605 other downstream 86466 7785554 ~ 7788321 (-) True G153733
TU193235 other downstream 1378216 6490255 ~ 6496571 (-) True AMCG00005674
TU193087 other downstream 1791921 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 2572589 5300769 ~ 5302198 (-) True G153130
TU192573 other downstream 3584895 4288665 ~ 4289892 (-) False AMCG00005539
TU193670 other upstream 124294 7999336 ~ 8001340 (-) False AMCG00005704
TU193709 other upstream 216706 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 1215380 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 1550248 9425290 ~ 9434940 (-) True G154250
TU194621 other upstream 2440338 10315380 ~ 10352782 (-) False AMCG00005850

Expression Profile