Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU194890 |
| length | 1316 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G154722 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 10997649 ~ 10999389 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0050879 | multicellular organismal movement | biological_process |
| GO:0050881 | musculoskeletal movement | biological_process |
| GO:0003009 | skeletal muscle contraction | biological_process |
| GO:0003010 | voluntary skeletal muscle contraction | biological_process |
| GO:0031444 | slow-twitch skeletal muscle fiber contraction | biological_process |
| GO:0014721 | twitch skeletal muscle contraction | biological_process |
| id | description |
|---|---|
| ko04260 | Cardiac muscle contraction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194697 | lncRNA | upstream | 282942 | 10690143 ~ 10714707 (+) | False | AMCG00005835 |
| TU194699 | lncRNA | upstream | 303696 | 10690143 ~ 10693953 (+) | True | AMCG00005835 |
| TU194696 | lncRNA | upstream | 329388 | 10667998 ~ 10668261 (+) | True | G154583 |
| TU194687 | lncRNA | upstream | 421212 | 10575979 ~ 10576437 (+) | True | G154574 |
| TU194598 | lncRNA | upstream | 471597 | 10523967 ~ 10526052 (+) | True | G154505 |
| TU194957 | lncRNA | downstream | 175006 | 11174395 ~ 11180237 (+) | True | G154775 |
| TU194983 | lncRNA | downstream | 320575 | 11319964 ~ 11361770 (+) | False | G154798 |
| TU195006 | lncRNA | downstream | 362616 | 11362005 ~ 11362233 (+) | True | G154815 |
| TU195007 | lncRNA | downstream | 371035 | 11370424 ~ 11370912 (+) | True | G154816 |
| TU195024 | lncRNA | downstream | 379391 | 11378780 ~ 11379289 (+) | True | G154831 |
| AMCG00005869 | mRNA | upstream | 34962 | 10929794 ~ 10962687 (+) | True | AMCG00005869 |
| AMCG00005868 | mRNA | upstream | 74102 | 10919948 ~ 10923547 (+) | True | AMCG00005868 |
| AMCG00005867 | mRNA | upstream | 84977 | 10906357 ~ 10912672 (+) | True | AMCG00005867 |
| AMCG00005826 | mRNA | upstream | 111402 | 10882619 ~ 10886247 (+) | True | AMCG00005826 |
| AMCG00005833 | mRNA | upstream | 150791 | 10845536 ~ 10846858 (+) | True | AMCG00005833 |
| AMCG00005840 | mRNA | downstream | 7409 | 11006798 ~ 11009861 (+) | False | AMCG00005840 |
| AMCG00005813 | mRNA | downstream | 93442 | 11092831 ~ 11097368 (+) | True | AMCG00005813 |
| AMCG00005812 | mRNA | downstream | 99020 | 11098409 ~ 11103223 (+) | True | AMCG00005812 |
| AMCG00005815 | mRNA | downstream | 140409 | 11139798 ~ 11140832 (+) | True | AMCG00005815 |
| AMCG00005816 | mRNA | downstream | 171625 | 11171014 ~ 11172074 (+) | True | AMCG00005816 |
| TU194757 | other | upstream | 81920 | 10913397 ~ 10915729 (+) | True | G154636 |
| TU194711 | other | upstream | 267440 | 10722332 ~ 10730209 (+) | False | AMCG00005834 |
| TU194591 | other | upstream | 481259 | 10512504 ~ 10516390 (+) | True | G154499 |
| TU194578 | other | upstream | 526018 | 10470543 ~ 10471631 (+) | True | G154486 |
| TU194579 | other | upstream | 529298 | 10462537 ~ 10468351 (+) | False | AMCG00005821 |
| TU194894 | other | downstream | 8155 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU194931 | other | downstream | 83772 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194985 | other | downstream | 320575 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU195111 | other | downstream | 603038 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU195202 | other | downstream | 903997 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
