RNA id: TU195331


Basic Information

Item Value
RNA id TU195331
length 453
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G155073
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12125161 ~ 12126128 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTCAGCGttggctttaaaaaataaaaacaatactgtaatCTGCAATCAAAGCGTCAGTGAGGAAAATGTGCAGTGACTACACTTTGTGGGCGAATAAAAAGCCCGCTTCGCTTTGGTGGCCGTGGCCAGGGAATCCCCACTGATTACTGCACATGATGCTGCGGAGAGTCCAGTCCTGACGTGGCGCCCAAGTTCAGTTCTCGCTTCCTTTCATTTCCCTTGTCTCTACTCGACTGTCCTCCCCAGCGGAGCCCCCCGTGGCTCTCACCTTTTCCAGCCTCCACTCCGTCTCCCCTCTTTTCTCCGAAGCGAGCGATTCACAGCGAGAGAGCAGCCGGATAAAATTGATTTCTCTCCGAGAGGACGCCATGTTTACAGCGGCAGCGGAAGCCGCCTGTCTCTGACGTCAtctctgggGTCCACAGATGAAGTCAGGTACTGCAGTGTCCAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU195312 lncRNA downstream 101489 12003140 ~ 12023672 (-) True G155058
TU195313 lncRNA downstream 107795 12007468 ~ 12017366 (-) True G155059
TU195245 lncRNA downstream 192214 11932112 ~ 11932947 (-) True G155003
TU195177 lncRNA downstream 435113 11689740 ~ 11690048 (-) True G154954
TU195122 lncRNA downstream 510778 11613674 ~ 11614383 (-) True G154909
TU195473 lncRNA upstream 321392 12447520 ~ 12447719 (-) True G155183
TU195546 lncRNA upstream 479595 12605723 ~ 12611445 (-) True G155235
TU195581 lncRNA upstream 569571 12695699 ~ 12696319 (-) False AMCG00005992
TU195584 lncRNA upstream 576009 12702137 ~ 12702641 (-) False AMCG00005992
TU195586 lncRNA upstream 580330 12706458 ~ 12706966 (-) False AMCG00005992
AMCG00005893 mRNA downstream 5208 12087043 ~ 12119953 (-) True AMCG00005893
AMCG00005905 mRNA downstream 131430 11984663 ~ 11993731 (-) True AMCG00005905
AMCG00005901 mRNA downstream 194311 11918788 ~ 11930850 (-) True AMCG00005901
AMCG00005899 mRNA downstream 207096 11906566 ~ 11918065 (-) True AMCG00005899
AMCG00005900 mRNA downstream 222771 11897018 ~ 11902390 (-) True AMCG00005900
AMCG00005960 mRNA upstream 68452 12194580 ~ 12212371 (-) True AMCG00005960
AMCG00005959 mRNA upstream 113205 12239333 ~ 12246234 (-) True AMCG00005959
AMCG00005961 mRNA upstream 140957 12267085 ~ 12280796 (-) True AMCG00005961
AMCG00005919 mRNA upstream 198972 12325100 ~ 12326263 (-) True AMCG00005919
AMCG00005918 mRNA upstream 209189 12335317 ~ 12340498 (-) True AMCG00005918
TU195020 other downstream 770528 11349245 ~ 11354633 (-) False AMCG00005879
TU195016 other downstream 786047 11336774 ~ 11339114 (-) False AMCG00005877
TU195013 other downstream 800094 11320737 ~ 11325067 (-) False AMCG00005876
TU194815 other downstream 1212416 10910516 ~ 10912745 (-) True G154677
TU194821 other downstream 1214729 10906295 ~ 10910432 (-) False G154677
TU195574 other upstream 545524 12671652 ~ 12672458 (-) False AMCG00005989
TU195614 other upstream 717650 12843778 ~ 12854803 (-) False AMCG00006063
TU196074 other upstream 2041962 14168090 ~ 14171607 (-) False AMCG00005997
TU196147 other upstream 2210763 14336891 ~ 14340663 (-) True AMCG00006013
TU196220 other upstream 2383105 14509233 ~ 14509614 (-) True G155770

Expression Profile