RNA id: TU196075


Basic Information

Item Value
RNA id TU196075
length 206
lncRNA type intronic
GC content 0.33
exon number 2
gene id G155655
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14166179 ~ 14166404 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAGCCTTGCATATAGCTTTTACGTCTCCTATTATCATTTTTTGAATTGTTTAATCACCTGGAGCCGATTATAAGTCATTTTAATGATAgacacctccggggacggtcatctccccctgctggagcccattttatgaatgattgccttttaaaatgacttttaaaaatgaattttaactgtttttaaagatttagttgtttttaaa

Function

GO:

id name namespace
GO:0048513 animal organ development biological_process
GO:0005520 insulin-like growth factor binding molecular_function
GO:0019838 growth factor binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU196072 lncRNA downstream 73722 14089336 ~ 14092457 (-) True G155652
TU196003 lncRNA downstream 281551 13883591 ~ 13884628 (-) True G155593
TU196001 lncRNA downstream 285009 13876723 ~ 13881170 (-) True G155591
TU195941 lncRNA downstream 378545 13786006 ~ 13787634 (-) True G155550
TU195905 lncRNA downstream 467645 13665734 ~ 13698534 (-) True AMCG00005971
TU196134 lncRNA upstream 134071 14300475 ~ 14305697 (-) True G155701
TU196135 lncRNA upstream 134071 14300475 ~ 14305697 (-) False G155701
TU196137 lncRNA upstream 152575 14318979 ~ 14323114 (-) True G155703
TU196154 lncRNA upstream 203357 14369761 ~ 14370182 (-) True G155717
TU196199 lncRNA upstream 256100 14422504 ~ 14424746 (-) True G155754
AMCG00005999 mRNA downstream 29568 14092900 ~ 14136611 (-) True AMCG00005999
AMCG00005982 mRNA downstream 233375 13926910 ~ 13932804 (-) True AMCG00005982
AMCG00005983 mRNA downstream 241317 13917335 ~ 13924862 (-) True AMCG00005983
AMCG00006004 mRNA downstream 324217 13830917 ~ 13841962 (-) True AMCG00006004
AMCG00006005 mRNA downstream 338593 13814192 ~ 13827586 (-) True AMCG00006005
AMCG00005998 mRNA upstream 7441 14173845 ~ 14179120 (-) True AMCG00005998
AMCG00005996 mRNA upstream 20844 14187248 ~ 14198914 (-) True AMCG00005996
AMCG00006012 mRNA upstream 83387 14249791 ~ 14256738 (-) True AMCG00006012
AMCG00006014 mRNA upstream 97984 14264388 ~ 14272009 (-) True AMCG00006014
AMCG00006013 mRNA upstream 170537 14336941 ~ 14341603 (-) False AMCG00006013
TU195614 other downstream 1311376 12843778 ~ 12854803 (-) False AMCG00006063
TU195574 other downstream 1493721 12671652 ~ 12672458 (-) False AMCG00005989
TU195020 other downstream 2811546 11349245 ~ 11354633 (-) False AMCG00005879
TU195016 other downstream 2827065 11336774 ~ 11339114 (-) False AMCG00005877
TU195013 other downstream 2841112 11320737 ~ 11325067 (-) False AMCG00005876
TU196074 other upstream 1686 14168090 ~ 14171607 (-) False AMCG00005997
TU196147 other upstream 170487 14336891 ~ 14340663 (-) True AMCG00006013
TU196220 other upstream 342829 14509233 ~ 14509614 (-) True G155770
TU196273 other upstream 513393 14679797 ~ 14682961 (-) True AMCG00006037
TU196327 other upstream 616227 14782631 ~ 14784006 (-) False AMCG00006043

Expression Profile