RNA id: TU196135


Basic Information

Item Value
RNA id TU196135
length 543
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G155701
representative False

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14300475 ~ 14305697 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACGTCAGTGGCCTTCTTCTCAGACAGTTCCAGTTTCTCCTGGGCATCTTTCAATGCTTCAGAGTATTTGTCCAGCTCGTCCTCAGTACTTTTCAGCTTCTTCTGCAAGCTGCTTGCACTTGTCCTCCGCAGCTTTCTTGTCGGACTCTGCCTGCTCCGCGCGGTCGATGGCATTCTCCTTGTCCAGCTTCAGCATCTGCATCTTCTTCTTGATGGCTTCCATTTTGGCGTTTGTTTTGGGGGTCTGGGGTTGCTcaaggaaatgaagaaaaaccaaaaaccaaaacaccaaaaaaaaaaagaaatcaaattaaatcaaagcagCTCAGTCGACAACAAGAAGAAATCAGGAGAAAAAGAGGACCGGAGAGCCTTCAATGGTAATGCTGGAGCCCCACacaaacagagggagagagagagagagagagagagtaagggAGAGAACACCAGGGATACAGACTGAGACCCAGTGCTGCCTAGATAGCTTTAAACTCCTACAAACACCCGACTCTAGGTTTTGGAGAGAGCCGTGGTCCCCGGTGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU196075 lncRNA downstream 134071 14166179 ~ 14166404 (-) True G155655
TU196072 lncRNA downstream 208018 14089336 ~ 14092457 (-) True G155652
TU196003 lncRNA downstream 415847 13883591 ~ 13884628 (-) True G155593
TU196001 lncRNA downstream 419305 13876723 ~ 13881170 (-) True G155591
TU195941 lncRNA downstream 512841 13786006 ~ 13787634 (-) True G155550
TU196137 lncRNA upstream 13282 14318979 ~ 14323114 (-) True G155703
TU196154 lncRNA upstream 64064 14369761 ~ 14370182 (-) True G155717
TU196199 lncRNA upstream 116807 14422504 ~ 14424746 (-) True G155754
TU196218 lncRNA upstream 183593 14489290 ~ 14491929 (-) True G155768
TU196235 lncRNA upstream 263865 14569562 ~ 14569836 (-) True G155783
AMCG00006014 mRNA downstream 28466 14264388 ~ 14272009 (-) True AMCG00006014
AMCG00006012 mRNA downstream 43737 14249791 ~ 14256738 (-) True AMCG00006012
AMCG00005996 mRNA downstream 101561 14187248 ~ 14198914 (-) True AMCG00005996
AMCG00005998 mRNA downstream 121355 14173845 ~ 14179120 (-) True AMCG00005998
AMCG00005997 mRNA downstream 128910 14159131 ~ 14171565 (-) True AMCG00005997
AMCG00006013 mRNA upstream 31244 14336941 ~ 14341603 (-) False AMCG00006013
AMCG00006015 mRNA upstream 64712 14370409 ~ 14374943 (-) True AMCG00006015
AMCG00006028 mRNA upstream 77973 14383670 ~ 14391108 (-) True AMCG00006028
AMCG00006029 mRNA upstream 87757 14393454 ~ 14401173 (-) True AMCG00006029
AMCG00006027 mRNA upstream 136213 14441910 ~ 14445493 (-) True AMCG00006027
TU196074 other downstream 128868 14168090 ~ 14171607 (-) False AMCG00005997
TU195614 other downstream 1445672 12843778 ~ 12854803 (-) False AMCG00006063
TU195574 other downstream 1628017 12671652 ~ 12672458 (-) False AMCG00005989
TU195020 other downstream 2945842 11349245 ~ 11354633 (-) False AMCG00005879
TU195016 other downstream 2961361 11336774 ~ 11339114 (-) False AMCG00005877
TU196147 other upstream 31194 14336891 ~ 14340663 (-) True AMCG00006013
TU196220 other upstream 203536 14509233 ~ 14509614 (-) True G155770
TU196273 other upstream 374100 14679797 ~ 14682961 (-) True AMCG00006037
TU196327 other upstream 476934 14782631 ~ 14784006 (-) False AMCG00006043
TU196602 other upstream 1127735 15433432 ~ 15436866 (-) True G156088

Expression Profile