RNA id: TU196640


Basic Information

Item Value
RNA id TU196640
length 226
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G156113
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15615562 ~ 15615787 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtgagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcatgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgccc

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU196629 lncRNA downstream 30796 15581857 ~ 15584766 (-) True G156104
TU196599 lncRNA downstream 178696 15435124 ~ 15436866 (-) False G156088
TU196556 lncRNA downstream 183632 15427308 ~ 15431930 (-) True G156049
TU196553 lncRNA downstream 191712 15417978 ~ 15423850 (-) True G156048
TU196530 lncRNA downstream 247921 15366104 ~ 15367641 (-) True G156028
TU196754 lncRNA upstream 331421 15947208 ~ 15947527 (-) True G156203
TU196762 lncRNA upstream 379000 15994787 ~ 16000039 (-) True G156207
TU196784 lncRNA upstream 446946 16062733 ~ 16063072 (-) True G156225
TU196787 lncRNA upstream 450882 16066669 ~ 16071528 (-) True G156228
TU196920 lncRNA upstream 1035753 16651540 ~ 16671387 (-) True G156341
AMCG00006069 mRNA downstream 40875 15565462 ~ 15574687 (-) True AMCG00006069
AMCG00006067 mRNA downstream 56213 15544838 ~ 15559349 (-) True AMCG00006067
AMCG00006068 mRNA downstream 86238 15496753 ~ 15529324 (-) True AMCG00006068
AMCG00006082 mRNA downstream 126881 15483162 ~ 15488681 (-) True AMCG00006082
AMCG00006079 mRNA downstream 135244 15469241 ~ 15480318 (-) True AMCG00006079
AMCG00006075 mRNA upstream 157891 15773678 ~ 15776508 (-) True AMCG00006075
AMCG00006085 mRNA upstream 162420 15778207 ~ 15784001 (-) True AMCG00006085
AMCG00006086 mRNA upstream 173560 15789347 ~ 15818856 (-) True AMCG00006086
AMCG00006087 mRNA upstream 225125 15840912 ~ 15877424 (-) True AMCG00006087
AMCG00006116 mRNA upstream 385766 16001553 ~ 16012344 (-) True AMCG00006116
TU196604 other downstream 123920 15489402 ~ 15491642 (-) False G156088
TU196602 other downstream 178696 15433432 ~ 15436866 (-) True G156088
TU196327 other downstream 831556 14782631 ~ 14784006 (-) False AMCG00006043
TU196273 other downstream 932601 14679797 ~ 14682961 (-) True AMCG00006037
TU196220 other downstream 1105948 14509233 ~ 14509614 (-) True G155770
TU196760 other upstream 338289 15954076 ~ 15957090 (-) True G156206
TU196870 other upstream 838582 16454369 ~ 16462159 (-) False AMCG00006083
TU196884 other upstream 889806 16505593 ~ 16518111 (-) False AMCG00006118
TU196919 other upstream 1054014 16669801 ~ 16671387 (-) False G156341
TU196984 other upstream 1332210 16947997 ~ 16950117 (-) False AMCG00006127

Expression Profile