RNA id: TU197529



Basic Information


Item Value
RNA id TU197529
length 313
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G156846
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18955723 ~ 18956035 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcaccgctcatcacctggccaataccatccctacagtgaagcatggtggtggcagcatcatgcggTGGCGATGTTTTTctgcggcaggaactgggagactagtcaggatcgagggaaagatgaatgcagcaatgtacagagacatccttgatgaaaacctgctccagagcactctggacctcagactggggctaAGGTTCATcatccaacaggacaacgacccttagcacacagccaagataacaaaggagtggctacaggacaactctgtgaatgtccttgagtggcccagccagagcccagacttgaaccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU197489 lncRNA downstream 111807 18840801 ~ 18843916 (-) True G156812
TU197464 lncRNA downstream 213514 18741351 ~ 18742209 (-) True G156791
TU197383 lncRNA downstream 417480 18533183 ~ 18538243 (-) True G156717
TU197382 lncRNA downstream 423276 18532062 ~ 18532447 (-) True G156716
TU197358 lncRNA downstream 521478 18433606 ~ 18434245 (-) True G156696
TU197530 lncRNA upstream 68 18956103 ~ 18956315 (-) True G156847
TU197547 lncRNA upstream 76095 19032130 ~ 19032334 (-) True G156862
TU197633 lncRNA upstream 434042 19390077 ~ 19390399 (-) True G156929
TU197636 lncRNA upstream 443399 19399434 ~ 19399637 (-) True G156932
TU197640 lncRNA upstream 446147 19402182 ~ 19413340 (-) True G156935
AMCG00006161 mRNA downstream 68580 18853693 ~ 18887143 (-) True AMCG00006161
AMCG00006172 mRNA downstream 103644 18833330 ~ 18852079 (-) True AMCG00006172
AMCG00006171 mRNA downstream 134317 18814417 ~ 18821406 (-) True AMCG00006171
AMCG00006160 mRNA downstream 175330 18774925 ~ 18780393 (-) True AMCG00006160
AMCG00006158 mRNA downstream 193075 18749834 ~ 18762648 (-) True AMCG00006158
AMCG00006166 mRNA upstream 125004 19081039 ~ 19116587 (-) True AMCG00006166
AMCG00006184 mRNA upstream 283330 19239365 ~ 19269061 (-) True AMCG00006184
AMCG00006199 mRNA upstream 346625 19302660 ~ 19306140 (-) True AMCG00006199
AMCG00006201 mRNA upstream 498601 19454636 ~ 19463205 (-) False AMCG00006201
AMCG00006195 mRNA upstream 868790 19824825 ~ 19859369 (-) True AMCG00006195
TU196984 other downstream 2005606 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 2284336 16669801 ~ 16671387 (-) False G156341
TU196884 other downstream 2437612 16505593 ~ 16518111 (-) False AMCG00006118
TU196870 other downstream 2493564 16454369 ~ 16462159 (-) False AMCG00006083
TU196760 other downstream 2998633 15954076 ~ 15957090 (-) True G156206
TU197609 other upstream 319165 19275200 ~ 19293820 (-) True G156907
TU197648 other upstream 492896 19448931 ~ 19451861 (-) False AMCG00006201
TU197805 other upstream 1753764 20709799 ~ 20712216 (-) True G157059

Expression Profile