RNA id: TU197547



Basic Information


Item Value
RNA id TU197547
length 205
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G156862
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19032130 ~ 19032334 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggATTCCAGGGCCTTCTCTGAATACCTTGAAGGCCCTGACAGTTCGCCACTGGTGAAAAAAGATCTTCAGCATtgtcaattcaaattaatttccctGAGTTTGGAGCTAAGGATAAAGCTGTTGGATTTGGAGCTGTTGGAGATCCCATGGGGTTTATTGAgttaagtaattattattattaagtaagGATTTCTTAGAGATTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU197530 lncRNA downstream 75815 18956103 ~ 18956315 (-) True G156847
TU197529 lncRNA downstream 76095 18955723 ~ 18956035 (-) True G156846
TU197489 lncRNA downstream 188214 18840801 ~ 18843916 (-) True G156812
TU197464 lncRNA downstream 289921 18741351 ~ 18742209 (-) True G156791
TU197383 lncRNA downstream 493887 18533183 ~ 18538243 (-) True G156717
TU197633 lncRNA upstream 357743 19390077 ~ 19390399 (-) True G156929
TU197636 lncRNA upstream 367100 19399434 ~ 19399637 (-) True G156932
TU197640 lncRNA upstream 369848 19402182 ~ 19413340 (-) True G156935
TU197650 lncRNA upstream 416699 19449033 ~ 19451861 (-) False AMCG00006201
TU197651 lncRNA upstream 423055 19455389 ~ 19460205 (-) True AMCG00006201
AMCG00006161 mRNA downstream 144987 18853693 ~ 18887143 (-) True AMCG00006161
AMCG00006172 mRNA downstream 180051 18833330 ~ 18852079 (-) True AMCG00006172
AMCG00006171 mRNA downstream 210724 18814417 ~ 18821406 (-) True AMCG00006171
AMCG00006160 mRNA downstream 251737 18774925 ~ 18780393 (-) True AMCG00006160
AMCG00006158 mRNA downstream 269482 18749834 ~ 18762648 (-) True AMCG00006158
AMCG00006166 mRNA upstream 48705 19081039 ~ 19116587 (-) True AMCG00006166
AMCG00006184 mRNA upstream 207031 19239365 ~ 19269061 (-) True AMCG00006184
AMCG00006199 mRNA upstream 270326 19302660 ~ 19306140 (-) True AMCG00006199
AMCG00006201 mRNA upstream 422302 19454636 ~ 19463205 (-) False AMCG00006201
AMCG00006195 mRNA upstream 792491 19824825 ~ 19859369 (-) True AMCG00006195
TU196984 other downstream 2082013 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 2360743 16669801 ~ 16671387 (-) False G156341
TU196884 other downstream 2514019 16505593 ~ 16518111 (-) False AMCG00006118
TU196870 other downstream 2569971 16454369 ~ 16462159 (-) False AMCG00006083
TU196760 other downstream 3075040 15954076 ~ 15957090 (-) True G156206
TU197609 other upstream 242866 19275200 ~ 19293820 (-) True G156907
TU197648 other upstream 416597 19448931 ~ 19451861 (-) False AMCG00006201
TU197805 other upstream 1677465 20709799 ~ 20712216 (-) True G157059

Expression Profile