RNA id: TU197633



Basic Information


Item Value
RNA id TU197633
length 323
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G156929
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19390077 ~ 19390399 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cagtaaaagacttcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggttacagacgagggctacgggaaagggagcaaggaggaaaacaatcaagaacgtgaggagcataataagctgaagtgctatctagccaggatagaggactaatattacaagtgatgttggaagagatgcgtcttgagtaagcgccggaatgaggtcaaggactctgctgttttgacttcggtgggcaggttgttccaccacttaggggccagggatgagaaggagcaggctctggaggaaggagagtggagaggaggcagagttag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU197547 lncRNA downstream 357743 19032130 ~ 19032334 (-) True G156862
TU197530 lncRNA downstream 433762 18956103 ~ 18956315 (-) True G156847
TU197529 lncRNA downstream 434042 18955723 ~ 18956035 (-) True G156846
TU197489 lncRNA downstream 546161 18840801 ~ 18843916 (-) True G156812
TU197464 lncRNA downstream 647868 18741351 ~ 18742209 (-) True G156791
TU197636 lncRNA upstream 9035 19399434 ~ 19399637 (-) True G156932
TU197640 lncRNA upstream 11783 19402182 ~ 19413340 (-) True G156935
TU197650 lncRNA upstream 58634 19449033 ~ 19451861 (-) False AMCG00006201
TU197651 lncRNA upstream 64990 19455389 ~ 19460205 (-) True AMCG00006201
TU197658 lncRNA upstream 89069 19479468 ~ 19480437 (-) True G156946
AMCG00006199 mRNA downstream 83937 19302660 ~ 19306140 (-) True AMCG00006199
AMCG00006184 mRNA downstream 121016 19239365 ~ 19269061 (-) True AMCG00006184
AMCG00006166 mRNA downstream 273490 19081039 ~ 19116587 (-) True AMCG00006166
AMCG00006161 mRNA downstream 502934 18853693 ~ 18887143 (-) True AMCG00006161
AMCG00006172 mRNA downstream 537998 18833330 ~ 18852079 (-) True AMCG00006172
AMCG00006201 mRNA upstream 64237 19454636 ~ 19463205 (-) False AMCG00006201
AMCG00006195 mRNA upstream 434426 19824825 ~ 19859369 (-) True AMCG00006195
AMCG00006196 mRNA upstream 481493 19871892 ~ 19874931 (-) True AMCG00006196
AMCG00006197 mRNA upstream 489651 19880050 ~ 19881917 (-) True AMCG00006197
AMCG00006194 mRNA upstream 505026 19895425 ~ 19922471 (-) True AMCG00006194
TU197609 other downstream 96257 19275200 ~ 19293820 (-) True G156907
TU196984 other downstream 2439960 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 2718690 16669801 ~ 16671387 (-) False G156341
TU196884 other downstream 2871966 16505593 ~ 16518111 (-) False AMCG00006118
TU196870 other downstream 2927918 16454369 ~ 16462159 (-) False AMCG00006083
TU197648 other upstream 58532 19448931 ~ 19451861 (-) False AMCG00006201
TU197805 other upstream 1319400 20709799 ~ 20712216 (-) True G157059

Expression Profile