RNA id: TU197636



Basic Information


Item Value
RNA id TU197636
length 204
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G156932
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19399434 ~ 19399637 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgatcacttctttgtcagtgggcaaacatacaaaatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU197633 lncRNA downstream 9035 19390077 ~ 19390399 (-) True G156929
TU197547 lncRNA downstream 367100 19032130 ~ 19032334 (-) True G156862
TU197530 lncRNA downstream 443119 18956103 ~ 18956315 (-) True G156847
TU197529 lncRNA downstream 443399 18955723 ~ 18956035 (-) True G156846
TU197489 lncRNA downstream 555518 18840801 ~ 18843916 (-) True G156812
TU197640 lncRNA upstream 2545 19402182 ~ 19413340 (-) True G156935
TU197650 lncRNA upstream 49396 19449033 ~ 19451861 (-) False AMCG00006201
TU197651 lncRNA upstream 55752 19455389 ~ 19460205 (-) True AMCG00006201
TU197658 lncRNA upstream 79831 19479468 ~ 19480437 (-) True G156946
TU197659 lncRNA upstream 85913 19485550 ~ 19489841 (-) True G156947
AMCG00006199 mRNA downstream 93294 19302660 ~ 19306140 (-) True AMCG00006199
AMCG00006184 mRNA downstream 130373 19239365 ~ 19269061 (-) True AMCG00006184
AMCG00006166 mRNA downstream 282847 19081039 ~ 19116587 (-) True AMCG00006166
AMCG00006161 mRNA downstream 512291 18853693 ~ 18887143 (-) True AMCG00006161
AMCG00006172 mRNA downstream 547355 18833330 ~ 18852079 (-) True AMCG00006172
AMCG00006201 mRNA upstream 54999 19454636 ~ 19463205 (-) False AMCG00006201
AMCG00006195 mRNA upstream 425188 19824825 ~ 19859369 (-) True AMCG00006195
AMCG00006196 mRNA upstream 472255 19871892 ~ 19874931 (-) True AMCG00006196
AMCG00006197 mRNA upstream 480413 19880050 ~ 19881917 (-) True AMCG00006197
AMCG00006194 mRNA upstream 495788 19895425 ~ 19922471 (-) True AMCG00006194
TU197609 other downstream 105614 19275200 ~ 19293820 (-) True G156907
TU196984 other downstream 2449317 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 2728047 16669801 ~ 16671387 (-) False G156341
TU196884 other downstream 2881323 16505593 ~ 16518111 (-) False AMCG00006118
TU196870 other downstream 2937275 16454369 ~ 16462159 (-) False AMCG00006083
TU197648 other upstream 49294 19448931 ~ 19451861 (-) False AMCG00006201
TU197805 other upstream 1310162 20709799 ~ 20712216 (-) True G157059

Expression Profile