RNA id: TU197809


Basic Information

Item Value
RNA id TU197809
length 709
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G157063
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 20744246 ~ 20744954 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGAAGTTGATCATTGGTCAGGATCTAGTGAACAGGTTAGATCCACTTATCGATTGCAAACGGAACAAGTTGTGGGCTCAAGTTCAATCACCAAAGCAGGTGGAATTGAATGACAGATATGATACAGCCACCAAGGTACAACTTCCCAATGAGACCATTTTTGTGCATGTCCCTAAAGGGGGCACCGGCTTACCATGTAAGCCAACCATTCGAACCCAGGTCCCTACCAACTATTATAGACATAGTGAAGGTCAGGTGCCTGAATAACACTTGAATTCCCAGTCACCTCCCTTTGTTAATCAACTTCCACCTATTGGTTACTGTCAGTAACCGTACTCAATCCTGAGTAATACTAAtaccaattgtttttttttgttttgtttttaatgtacttgtGTTATAATATGTAACCTGTATATGTATTAGTATAGGATTGTCAATTTGATTGGAATACATTCTGCTTAGATAATGAACTATTAGTTTGTTATCTTTGATTTCTCGGGGTCATGAATGGTGAAGTCCACTGTTGAATTCTGTTACATAACTTTGATATAAATGCTTAACGTCTTATTTTGTCTCGAAGGGGATAACGTCCTAGTCGACCTCAGTCCCATTCAAGAAAGGGGgtatgtagcgttatgttgggtgtattttgataagagcattttggctctgagctgaagcactgatctaaagaagacctctcccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU197803 lncRNA downstream 146 20624073 ~ 20744100 (-) True G157057
TU197801 lncRNA downstream 146 20696280 ~ 20744100 (-) False G157057
TU197791 lncRNA downstream 155451 20575443 ~ 20588795 (-) True G157055
TU197792 lncRNA downstream 155451 20575443 ~ 20588795 (-) False G157055
TU197776 lncRNA downstream 257572 20450472 ~ 20486674 (-) True G157042
TU197859 lncRNA upstream 302862 21047816 ~ 21048023 (-) True G157104
TU197860 lncRNA upstream 303260 21048214 ~ 21048621 (-) True G157105
AMCG00006193 mRNA downstream 755835 19984679 ~ 19988411 (-) True AMCG00006193
AMCG00006194 mRNA downstream 821775 19895425 ~ 19922471 (-) True AMCG00006194
AMCG00006197 mRNA downstream 862329 19880050 ~ 19881917 (-) True AMCG00006197
AMCG00006196 mRNA downstream 869315 19871892 ~ 19874931 (-) True AMCG00006196
AMCG00006195 mRNA downstream 884877 19824825 ~ 19859369 (-) True AMCG00006195
TU197805 other downstream 32030 20709799 ~ 20712216 (-) True G157059
TU197648 other downstream 1292385 19448931 ~ 19451861 (-) False AMCG00006201
TU197609 other downstream 1450426 19275200 ~ 19293820 (-) True G156907
TU196984 other downstream 3794129 16947997 ~ 16950117 (-) False AMCG00006127
TU196919 other downstream 4072859 16669801 ~ 16671387 (-) False G156341

Expression Profile