RNA id: AMCG00006209


Basic Information

Item Value
RNA id AMCG00006209
length 1421
RNA type mRNA
GC content 0.64
exon number 7
gene id AMCG00006209
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 142072 ~ 146398 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACGGGGGCGAAGGGGGATGAGGAAGTGAGCAGTTTCACAATGAGACGCGGAGACGGGTCTGAAGAGGCGCAGGGATCCAGAGTGGCGTTGAGACGGACATACGGACAGATAGACGGCCAGTGAAATCTTCCGATCGATAGCGATGCGTGCTGCAACGTGTTTGACTGTCCTGCAGTTCCTCTGTCTGGCAGCAGGGGGAGCTCTGTCTGCAATCTCCTGCTACAACGACCAGGGGACGGCCGTGGACTGgctgtaTCTATACAAGCTCCCCCGGCCCTCTCAGAGCCCCCCGGAGGAGGGGATGCGCTACCTGCTGCTGCAGCCAGGGGGCGGGGCCTGGACACAGGGGGCGGGACTAGTGAACGACAGCGGGGAAGCGCTGGGCCGCACTGTGGGACAGCTGTACAAACTGGGACAGGAGGAGGATGTGGCCTACATCCTGTACAATGACCAGACTCCTCCGAGccacggagagagggagaagaacgAGTGTGGGCACACTAAGGGTGTGGTCCTATTGGACAAGACTCAGGGCTTCTGGTTGGTCCACAGCACGCCTCACTTCCCCCCGAGACAGGAAGTGGGCACGTTCTCGTACCCGGAGACAGGGGTGGAGAACGGACAGAACTTCCTGTGCGTGACCTTCCCTGTGGAGCGGTTCCAGAGCATCGGAGAGCAGCTGCAGCTCAACCAGCCCCTGGTGTACGACTGCTCCGTGCCCCCCGCACTCGCCTCCGTCCTGCCCGCCCTCAACCAGCTCTGCAGGAAGGACCGCGCGCCGCCGCCCCCCCCGCGCTCCCTCGCCGAGCGGGACAACCGCAGTGCGTCCCTGCTGTCTCTGGGGGGGGCGTCCTTCACCAGCTTCGCCAAGAGCGCCTCCTTCGGTGACGacCTCTATGTGTCCTGGGTCGCTCCCTCCCTGCAGTCGGACCTGTTGGTGCAGTTCTGGCGCCGCTCGGCCGGAGTTCTGCCCTCCAACTGCTCCCTCAGCCAGCGGGTGCTGAACGTGCAGCGCATCGGGcccggggggggcgggggaggtgTGGAGCCGTTCAAATCCACGCAGGATCACTCCAAGTGGGCAGTGAGTGTGGAGGGACAGGGCCAGCCAGGAGAGGGGGGGGGCTGGGTCTGCGTGGGAGACATCAACCGCAACCTGgcggaggagaggagagggggagggacgGTGTGTGTGCAGGAGGTGGAGGTGTGGAAGGCGTACAGGACCGCTGTACTGGAGTTCGAGGACTgctagagagagggagggagagagagggaggggacgGAGTGTCCACTGGAGCTGTTACTGCACTGAATAAAGAGCCACTCGGATCAACAATGTACTGGTGTCGGCATCCCTCCCTGTGTCTGTCCGTCAATCGAtgcccccctctccctccccctctcttctgTAACTCTGC

Function

GO: NA

KEGG:

id description
K01158 DNASE2; deoxyribonuclease II

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135481 lncRNA downstream 23673 117137 ~ 118399 (-) True G108349
TU135461 lncRNA downstream 102723 33213 ~ 39349 (-) True G108329
TU135442 lncRNA downstream 120722 17554 ~ 21350 (-) True G108323
TU135451 lncRNA upstream 6834 153232 ~ 225141 (-) False G108324
TU135444 lncRNA upstream 14763 161161 ~ 225141 (-) False G108324
TU135443 lncRNA upstream 15129 161527 ~ 225141 (-) False G108324
TU135450 lncRNA upstream 15129 161527 ~ 225141 (-) False G108324
TU135502 lncRNA upstream 124358 270756 ~ 278261 (-) True G108365
AMCG00006212 mRNA downstream 33530 99902 ~ 108542 (-) True AMCG00006212
AMCG00006211 mRNA downstream 52583 70319 ~ 89489 (-) True AMCG00006211
AMCG00006203 mRNA downstream 97945 10483 ~ 44127 (-) True AMCG00006203
AMCG00006210 mRNA upstream 973 147371 ~ 150061 (-) True AMCG00006210
AMCG00006213 mRNA upstream 17204 163602 ~ 165518 (-) True AMCG00006213
AMCG00006214 mRNA upstream 19522 165920 ~ 172382 (-) True AMCG00006214
AMCG00006219 mRNA upstream 34986 181384 ~ 195349 (-) True AMCG00006219
AMCG00006220 mRNA upstream 89928 236326 ~ 242133 (-) True AMCG00006220
TU135453 other upstream 74873 221271 ~ 225141 (-) True G108324
TU135530 other upstream 190338 336736 ~ 339948 (-) True G108379
TU135541 other upstream 249026 395424 ~ 395979 (-) False AMCG00006232
TU135562 other upstream 333184 479582 ~ 546146 (-) False AMCG00006241
TU135628 other upstream 585043 731441 ~ 735410 (-) False AMCG00006245

Expression Profile