RNA id: AMCG00006212


Basic Information

Item Value
RNA id AMCG00006212
length 183
RNA type mRNA
GC content 0.65
exon number 3
gene id AMCG00006212
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 99902 ~ 108542 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGTGGGCCCTGCAGGGCCAGGCTGGGCTCAGGGCAGatgcgAGGTGTGCCGCGCCCCCCCCCAGTGCCTAtcgcccccccccctcccacgCTCCGTACGACCGGCCCGGCTGGAACCCCCGTCTCTGTGTGATCTCTGGAAACCAGCTCTATATtgtgttaGGGGTTTCAAAGGTCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135461 lncRNA downstream 60553 33213 ~ 39349 (-) True G108329
TU135442 lncRNA downstream 78552 17554 ~ 21350 (-) True G108323
TU135481 lncRNA upstream 8595 117137 ~ 118399 (-) True G108349
TU135445 lncRNA upstream 20183 128725 ~ 225141 (-) False G108324
TU135452 lncRNA upstream 20183 128725 ~ 225141 (-) False G108324
TU135462 lncRNA upstream 32017 140559 ~ 175193 (-) True G108330
TU135451 lncRNA upstream 44690 153232 ~ 225141 (-) False G108324
AMCG00006211 mRNA downstream 10413 70319 ~ 89489 (-) True AMCG00006211
AMCG00006203 mRNA downstream 55775 10483 ~ 44127 (-) True AMCG00006203
AMCG00006209 mRNA upstream 33530 142072 ~ 146398 (-) True AMCG00006209
AMCG00006210 mRNA upstream 38829 147371 ~ 150061 (-) True AMCG00006210
AMCG00006213 mRNA upstream 55060 163602 ~ 165518 (-) True AMCG00006213
AMCG00006214 mRNA upstream 57378 165920 ~ 172382 (-) True AMCG00006214
AMCG00006219 mRNA upstream 72842 181384 ~ 195349 (-) True AMCG00006219
TU135453 other upstream 112729 221271 ~ 225141 (-) True G108324
TU135530 other upstream 228194 336736 ~ 339948 (-) True G108379
TU135541 other upstream 286882 395424 ~ 395979 (-) False AMCG00006232
TU135562 other upstream 371040 479582 ~ 546146 (-) False AMCG00006241
TU135628 other upstream 622899 731441 ~ 735410 (-) False AMCG00006245