Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006234 |
| length | 678 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | AMCG00006234 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 569404 ~ 576257 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0002376 | immune system process | biological_process |
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| K06752 | MHC2; MHC class II antigen |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135368 | lncRNA | upstream | 133783 | 435401 ~ 435621 (+) | True | G108263 |
| TU135359 | lncRNA | upstream | 164064 | 384397 ~ 405340 (+) | True | G108256 |
| TU135353 | lncRNA | upstream | 164140 | 397163 ~ 405264 (+) | True | G108252 |
| TU135354 | lncRNA | upstream | 176611 | 374136 ~ 392793 (+) | True | G108253 |
| TU135341 | lncRNA | upstream | 255991 | 311554 ~ 313413 (+) | True | G108248 |
| TU135408 | lncRNA | downstream | 73480 | 649737 ~ 652140 (+) | False | AMCG00006236 |
| TU135427 | lncRNA | downstream | 131800 | 708057 ~ 708928 (+) | True | G108312 |
| TU135429 | lncRNA | downstream | 151620 | 727877 ~ 730186 (+) | True | G108314 |
| TU135434 | lncRNA | downstream | 197402 | 773659 ~ 774039 (+) | True | G108318 |
| TU135422 | lncRNA | downstream | 205768 | 782025 ~ 782475 (+) | True | G108308 |
| AMCG00006233 | mRNA | upstream | 7139 | 547826 ~ 562265 (+) | True | AMCG00006233 |
| AMCG00006235 | mRNA | upstream | 77607 | 490705 ~ 491797 (+) | True | AMCG00006235 |
| AMCG00006231 | mRNA | upstream | 135970 | 426976 ~ 433434 (+) | False | AMCG00006231 |
| AMCG00006224 | mRNA | upstream | 232124 | 320671 ~ 337280 (+) | True | AMCG00006224 |
| AMCG00006225 | mRNA | upstream | 266819 | 299339 ~ 302585 (+) | True | AMCG00006225 |
| AMCG00006237 | mRNA | downstream | 34210 | 610467 ~ 633814 (+) | True | AMCG00006237 |
| AMCG00006236 | mRNA | downstream | 68461 | 644718 ~ 650823 (+) | True | AMCG00006236 |
| AMCG00006246 | mRNA | downstream | 270357 | 846614 ~ 855720 (+) | True | AMCG00006246 |
| AMCG00006252 | mRNA | downstream | 312821 | 889078 ~ 895444 (+) | True | AMCG00006252 |
| AMCG00006250 | mRNA | downstream | 320721 | 896978 ~ 908806 (+) | True | AMCG00006250 |
| TU135365 | other | upstream | 135499 | 429763 ~ 433905 (+) | True | AMCG00006231 |
| TU135311 | other | upstream | 390002 | 177138 ~ 179402 (+) | True | AMCG00006205 |
| TU135297 | other | upstream | 431383 | 134067 ~ 138021 (+) | False | AMCG00006208 |
| TU135436 | other | downstream | 198552 | 774809 ~ 791062 (+) | False | G108319 |
| TU135437 | other | downstream | 198552 | 774809 ~ 791062 (+) | True | G108319 |
| TU135656 | other | downstream | 270304 | 846561 ~ 848772 (+) | False | AMCG00006246 |
| TU135722 | other | downstream | 409616 | 985873 ~ 990822 (+) | False | AMCG00006256 |
| TU135810 | other | downstream | 704444 | 1280701 ~ 1286052 (+) | True | AMCG00006276 |
