RNA id: AMCG00006251



Basic Information


Item Value
RNA id AMCG00006251
length 588
RNA type mRNA
GC content 0.55
exon number 6
gene id AMCG00006251
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 924614 ~ 929086 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGTGGGATGATTCCAATCCCTGTCTTCACTTTGGGAACAGTCTCCTCAGCTCCTCCTCTCCTGGTGTTGTCGAGGCTGTGGGACTGGGCCACTCTGCCCTGCGATGGCACATCTTACACAGGGACTGTTGAAGACCTCTCCTATATTAACTACGTAGGCCAAGGCTTTGAGGACAGAGCTGAGGTCTCCTATGATAAGATCAGCCAGAGGGACTTCTCTCTGACCATTCACAACATCACCTTCTCTGATGAAGACATGTACGAGTGCTATTATGATAAAGACTATTATCTGACGTTTCTGGGAAGTGTTCGGCTCATTGTTGAAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagacTCTGTCTCAGTGTGCGCTGTGGAGAGGGGCGCAGCGAGCCGCCCTGGCCCCGGGTACGAGTTGCAGAGCGGCTCTCTGACCCTGCGCTCACTCACAGCCGCTGACCAGGGCCAGTACACAGTGAGGGACTGCAGCACCGGCCGCACCTTCAGCACCGTCTCTGTCTCCAGTCTCACTCCTCTGTTGGGATCGGAGTTGGCATTGTGGTGCCTTCACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU135441 lncRNA upstream 133781 789976 ~ 790833 (+) True G108322
TU135422 lncRNA upstream 142139 782025 ~ 782475 (+) True G108308
TU135434 lncRNA upstream 150575 773659 ~ 774039 (+) True G108318
TU135429 lncRNA upstream 194428 727877 ~ 730186 (+) True G108314
TU135427 lncRNA upstream 215686 708057 ~ 708928 (+) True G108312
TU135710 lncRNA downstream 4429 933515 ~ 933825 (+) True G108496
TU135742 lncRNA downstream 137950 1067036 ~ 1067725 (+) True G108513
TU135744 lncRNA downstream 141241 1070327 ~ 1070771 (+) True G108515
TU135746 lncRNA downstream 142208 1071294 ~ 1071772 (+) True G108516
TU135751 lncRNA downstream 233778 1162864 ~ 1193441 (+) True G108519
AMCG00006250 mRNA upstream 15808 896978 ~ 908806 (+) True AMCG00006250
AMCG00006252 mRNA upstream 29170 889078 ~ 895444 (+) True AMCG00006252
AMCG00006246 mRNA upstream 68894 846614 ~ 855720 (+) True AMCG00006246
AMCG00006236 mRNA upstream 273791 644718 ~ 650823 (+) True AMCG00006236
AMCG00006237 mRNA upstream 290800 610467 ~ 633814 (+) True AMCG00006237
AMCG00006249 mRNA downstream 3073 932159 ~ 946648 (+) True AMCG00006249
AMCG00006253 mRNA downstream 21836 950922 ~ 959903 (+) True AMCG00006253
AMCG00006254 mRNA downstream 45572 974658 ~ 982685 (+) True AMCG00006254
AMCG00006256 mRNA downstream 57251 986337 ~ 1003871 (+) True AMCG00006256
AMCG00006257 mRNA downstream 97117 1026203 ~ 1039280 (+) True AMCG00006257
TU135656 other upstream 75842 846561 ~ 848772 (+) False AMCG00006246
TU135436 other upstream 133552 774809 ~ 791062 (+) False G108319
TU135437 other upstream 133552 774809 ~ 791062 (+) True G108319
TU135365 other upstream 490709 429763 ~ 433905 (+) True AMCG00006231
TU135311 other upstream 745212 177138 ~ 179402 (+) True AMCG00006205
TU135722 other downstream 56787 985873 ~ 990822 (+) False AMCG00006256
TU135810 other downstream 351615 1280701 ~ 1286052 (+) True AMCG00006276
TU135836 other downstream 421297 1350383 ~ 1429987 (+) True G108585
TU135921 other downstream 806846 1735932 ~ 1739267 (+) True AMCG00006294
TU135896 other downstream 879471 1808557 ~ 1812675 (+) False G108626

Expression Profile