RNA id: AMCG00006290


Basic Information

Item Value
RNA id AMCG00006290
length 503
RNA type mRNA
GC content 0.62
exon number 4
gene id AMCG00006290
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1678262 ~ 1683356 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTGGAGGAGGGGTCCAGGGATGAAGGGAGGGTGTGAGaggaaaggaggagagagacgaCCTGCAGAGCTACACATCTGGTTTGCGCTGCCCATCGCCATGAACAGACTGCTGCTGTCCGTGCTCGCCATCGCGCTGTGCTTCGCCGTCGTGCAAGGGCTGCAGTGCTACGAGTGCCTGGGATTCTACAACCTATGCGTGACGTTGACCACCACCTGCAGCAGTGGACAGTCCTGCTTCCAGGGCCGAGGACAAGCAGcTGGGTTTGTGGACATCATCCAGAGGGGCTGCCTGGCAAATGCCAACTGCAACCAGCTGTCCAATGTCACCTTCCAGGGTGCCACCCTCTACAAGATGAACAAGACCTGCTGTGCCACGGACCTGTGCAACGCCGCCCCCGCCACCCACATCTCTGCGCTCTCTGCCATTGCTGTGGTGACTGCCTGGCTGACCACCAGCATGCTGTGAGCCCATTGgatgatccccccccccccccccccccccc

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136114 lncRNA downstream 7631 1664948 ~ 1670631 (-) True G108791
TU136113 lncRNA downstream 15229 1661753 ~ 1663033 (-) True G108790
TU136089 lncRNA downstream 117872 1504198 ~ 1560390 (-) True G108770
TU136091 lncRNA downstream 135901 1536944 ~ 1542361 (-) True G108772
TU136077 lncRNA downstream 268515 1405393 ~ 1409747 (-) True G108760
TU136111 lncRNA upstream 36273 1719629 ~ 1721131 (-) True G108789
TU136135 lncRNA upstream 50839 1734195 ~ 1783566 (-) True G108805
TU136170 lncRNA upstream 202609 1885965 ~ 1886276 (-) True G108834
TU136316 lncRNA upstream 369635 2052991 ~ 2057622 (-) True G108948
TU136289 lncRNA upstream 414462 2097818 ~ 2130255 (-) False G108938
AMCG00006292 mRNA downstream 40531 1600137 ~ 1637731 (-) True AMCG00006292
AMCG00006291 mRNA downstream 78805 1595672 ~ 1599457 (-) True AMCG00006291
AMCG00006283 mRNA downstream 122708 1550443 ~ 1555554 (-) True AMCG00006283
AMCG00006285 mRNA downstream 180208 1494360 ~ 1498054 (-) True AMCG00006285
AMCG00006284 mRNA downstream 184292 1474877 ~ 1493970 (-) True AMCG00006284
AMCG00006299 mRNA upstream 9887 1693243 ~ 1709505 (-) True AMCG00006299
AMCG00006298 mRNA upstream 39491 1722847 ~ 1723402 (-) False AMCG00006298
AMCG00006304 mRNA upstream 125300 1808656 ~ 1818368 (-) True AMCG00006304
AMCG00006305 mRNA upstream 183203 1866559 ~ 1870731 (-) True AMCG00006305
AMCG00006307 mRNA upstream 247278 1930634 ~ 1932402 (-) True AMCG00006307
TU136106 other downstream 18258 1646480 ~ 1660004 (-) True G108784
TU136064 other downstream 54888 1344516 ~ 1623374 (-) False AMCG00006292
TU136071 other downstream 123598 1350485 ~ 1554664 (-) True G108755
TU136076 other downstream 167722 1368082 ~ 1510540 (-) False AMCG00006279
TU136085 other downstream 203312 1473478 ~ 1474950 (-) False AMCG00006284
TU136131 other upstream 39205 1722561 ~ 1724848 (-) True AMCG00006298
TU136165 other upstream 197926 1881282 ~ 1881837 (-) True G108829
TU136306 other upstream 336645 2020001 ~ 2024143 (-) True AMCG00006313
TU136304 other upstream 414462 2097818 ~ 2130255 (-) False G108938
TU136502 other upstream 640775 2324131 ~ 2329991 (-) True AMCG00006328

Expression Profile