RNA id: AMCG00006291


Basic Information

Item Value
RNA id AMCG00006291
length 582
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00006291
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1595672 ~ 1599457 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTCGCTGTGTACTCCACTGTGGGGGGCAGTGCTACTCTGCCCTGTGAGGGAGCGACCAGTGGAATCTGTTCTGCGGTTGACTGGCTCTTTATTAAGGCACCTGGCGAACTTGTTCATCTGGTTAATCATGGGAGAGTCACAGCCACAGATCCAGAGAGAGCTGGGAGACTGAGTGTGGCGTCTGACTGCTCTCTGCACATAGACAGACTCCACACACAGGACACTGGACGGTACACCTGTCTACCATATTTCAATGGACGTGATTATCTAGTTAACCTGGCTCTTCTCAGTGAGACAGAGCTGAAGGCTGGCAGCATTGTGACTCTGCGCTGTTTCCTGGACACTGAACACGGCCCTGGAGTCTGCAGTCACCCGTACACCAGTGCTGATGTGAGACTGAGCTGGGTCTCTGAGACAGGCGCTGAGCTGCAGGGAGACACATACCAGATCTCCACTGATCAGCCCTGTCTCTCCACACTGACTGTGAGGCTCCAGACCTCAGACCACAACACACAGTGGAGATGTGATCTGACAGAGGGGGGAGCAGTGAGGGTCTCTCAGAGACACACCATTAAACTCACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136089 lncRNA downstream 35282 1504198 ~ 1560390 (-) True G108770
TU136091 lncRNA downstream 53311 1536944 ~ 1542361 (-) True G108772
TU136077 lncRNA downstream 185925 1405393 ~ 1409747 (-) True G108760
TU136073 lncRNA downstream 198341 1350085 ~ 1397331 (-) True G108756
TU136074 lncRNA downstream 236168 1359092 ~ 1359504 (-) False AMCG00006279
TU136113 lncRNA upstream 62296 1661753 ~ 1663033 (-) True G108790
TU136114 lncRNA upstream 65491 1664948 ~ 1670631 (-) True G108791
TU136111 lncRNA upstream 120172 1719629 ~ 1721131 (-) True G108789
TU136135 lncRNA upstream 134738 1734195 ~ 1783566 (-) True G108805
TU136170 lncRNA upstream 286508 1885965 ~ 1886276 (-) True G108834
AMCG00006283 mRNA downstream 40118 1550443 ~ 1555554 (-) True AMCG00006283
AMCG00006285 mRNA downstream 97618 1494360 ~ 1498054 (-) True AMCG00006285
AMCG00006284 mRNA downstream 101702 1474877 ~ 1493970 (-) True AMCG00006284
AMCG00006279 mRNA downstream 224258 1358397 ~ 1371414 (-) True AMCG00006279
AMCG00006277 mRNA downstream 254007 1338157 ~ 1341665 (-) False AMCG00006277
AMCG00006292 mRNA upstream 680 1600137 ~ 1637731 (-) True AMCG00006292
AMCG00006290 mRNA upstream 78805 1678262 ~ 1683356 (-) True AMCG00006290
AMCG00006299 mRNA upstream 93786 1693243 ~ 1709505 (-) True AMCG00006299
AMCG00006298 mRNA upstream 123390 1722847 ~ 1723402 (-) False AMCG00006298
AMCG00006304 mRNA upstream 209199 1808656 ~ 1818368 (-) True AMCG00006304
TU136071 other downstream 41008 1350485 ~ 1554664 (-) True G108755
TU136076 other downstream 85132 1368082 ~ 1510540 (-) False AMCG00006279
TU136085 other downstream 120722 1473478 ~ 1474950 (-) False AMCG00006284
TU136068 other downstream 242731 1350485 ~ 1352941 (-) False G108755
TU136062 other downstream 254227 1337187 ~ 1341445 (-) True AMCG00006277
TU136106 other upstream 47023 1646480 ~ 1660004 (-) True G108784
TU136131 other upstream 123104 1722561 ~ 1724848 (-) True AMCG00006298
TU136165 other upstream 281825 1881282 ~ 1881837 (-) True G108829
TU136306 other upstream 420544 2020001 ~ 2024143 (-) True AMCG00006313
TU136304 other upstream 498361 2097818 ~ 2130255 (-) False G108938

Expression Profile