RNA id: AMCG00006298


Basic Information

Item Value
RNA id AMCG00006298
length 273
RNA type mRNA
GC content 0.67
exon number 2
gene id AMCG00006298
representative False

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1722561 ~ 1724848 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTCCCTCAGAAATGCCCCCCAGGACAGCGCTGCCTTTCCAGCAAAGCCATTGGAACCAGAGGGGATTTCCGCGTGGTCTTCTATGAGAAGAGCTGTGTGGTGGCGGAGCTGTGCGGCGCCACGGGGGAGAAGCAAGCCATGGGCCTCAACTTCACCTTCACCAACACCTGCTGCGACGAGGACCTGTGCAACGCTGCCGCCCCCCGCTGGCCGCCCCCCGCCCCCGCGCTCGGCCTGGCGCTCGCCCTGACCCTCGCTGCCCAGGGCCTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136111 lncRNA downstream 1716 1719629 ~ 1721131 (-) True G108789
TU136114 lncRNA downstream 52216 1664948 ~ 1670631 (-) True G108791
TU136113 lncRNA downstream 59814 1661753 ~ 1663033 (-) True G108790
TU136089 lncRNA downstream 162457 1504198 ~ 1560390 (-) True G108770
TU136091 lncRNA downstream 180486 1536944 ~ 1542361 (-) True G108772
TU136135 lncRNA upstream 10793 1734195 ~ 1783566 (-) True G108805
TU136170 lncRNA upstream 162563 1885965 ~ 1886276 (-) True G108834
TU136316 lncRNA upstream 329589 2052991 ~ 2057622 (-) True G108948
TU136289 lncRNA upstream 374416 2097818 ~ 2130255 (-) False G108938
TU136288 lncRNA upstream 404391 2127793 ~ 2130255 (-) False G108938
AMCG00006299 mRNA downstream 13342 1693243 ~ 1709505 (-) True AMCG00006299
AMCG00006290 mRNA downstream 39491 1678262 ~ 1683356 (-) True AMCG00006290
AMCG00006292 mRNA downstream 85116 1600137 ~ 1637731 (-) True AMCG00006292
AMCG00006291 mRNA downstream 123390 1595672 ~ 1599457 (-) True AMCG00006291
AMCG00006283 mRNA downstream 167293 1550443 ~ 1555554 (-) True AMCG00006283
AMCG00006304 mRNA upstream 85254 1808656 ~ 1818368 (-) True AMCG00006304
AMCG00006305 mRNA upstream 143157 1866559 ~ 1870731 (-) True AMCG00006305
AMCG00006307 mRNA upstream 207232 1930634 ~ 1932402 (-) True AMCG00006307
AMCG00006314 mRNA upstream 267900 1991302 ~ 1999290 (-) True AMCG00006314
AMCG00006315 mRNA upstream 287960 2011362 ~ 2016934 (-) True AMCG00006315
TU136106 other downstream 62843 1646480 ~ 1660004 (-) True G108784
TU136071 other downstream 168183 1350485 ~ 1554664 (-) True G108755
TU136076 other downstream 212307 1368082 ~ 1510540 (-) False AMCG00006279
TU136085 other downstream 247897 1473478 ~ 1474950 (-) False AMCG00006284
TU136068 other downstream 369906 1350485 ~ 1352941 (-) False G108755
TU136165 other upstream 157880 1881282 ~ 1881837 (-) True G108829
TU136306 other upstream 296599 2020001 ~ 2024143 (-) True AMCG00006313
TU136304 other upstream 374416 2097818 ~ 2130255 (-) False G108938
TU136502 other upstream 600729 2324131 ~ 2329991 (-) True AMCG00006328
TU137277 other upstream 2441532 4164934 ~ 4165600 (-) True G109633

Expression Profile