RNA id: AMCG00006321


Basic Information

Item Value
RNA id AMCG00006321
length 402
RNA type mRNA
GC content 0.60
exon number 4
gene id AMCG00006321
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2124372 ~ 2128938 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTGATTAAGATTGACGAGCTGGACGTGTCGGTGCAGAGGGCAGCTGTGACTGTGTGGTTTAACCCTGCGGGCGCCGGTGCCTCTTTTCCAGTGTGTGCTGTAGAGGGCGGCACCGTGACCCCTGACCCTGCCTATGGGCCCCGAGTCTCAGGGCAGGAGCAGGAGGTCACACTGTCTGCACTGACCTTCACTGACCAGGGCTCCTACACAGTGCTGGACTCCCAGAGCAGAGCGACCATCAGCACTGTGAACGTCACTGTGACAGcTCACAGAGACTCCCTCACCCTGCGGTCTGGAGCCGCCCTCTCCCTCCGCCTGTTCACTGCTGAGCCAGTGGAgATGCCCAGAGGTGACATCCTGAAGACCCAGGAGTTCACTGAAAAGGGTGCTGTGGGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136316 lncRNA downstream 66750 2052991 ~ 2057622 (-) True G108948
TU136170 lncRNA downstream 238096 1885965 ~ 1886276 (-) True G108834
TU136135 lncRNA downstream 340806 1734195 ~ 1783566 (-) True G108805
TU136111 lncRNA downstream 403241 1719629 ~ 1721131 (-) True G108789
TU136114 lncRNA downstream 453741 1664948 ~ 1670631 (-) True G108791
TU136514 lncRNA upstream 217584 2346522 ~ 2390552 (-) True G109090
TU136517 lncRNA upstream 221816 2350754 ~ 2356238 (-) True G109091
TU136519 lncRNA upstream 221816 2350754 ~ 2356238 (-) False G109091
TU136520 lncRNA upstream 221816 2350754 ~ 2356238 (-) False G109091
TU136528 lncRNA upstream 265811 2394749 ~ 2397990 (-) True G109099
AMCG00006322 mRNA downstream 21483 2099167 ~ 2102889 (-) True AMCG00006322
AMCG00006320 mRNA downstream 25223 2097573 ~ 2099149 (-) True AMCG00006320
AMCG00006316 mRNA downstream 90137 2027136 ~ 2034235 (-) True AMCG00006316
AMCG00006313 mRNA downstream 102507 2020894 ~ 2021865 (-) False AMCG00006313
AMCG00006315 mRNA downstream 107438 2011362 ~ 2016934 (-) True AMCG00006315
AMCG00006319 mRNA upstream 7886 2136824 ~ 2140157 (-) True AMCG00006319
AMCG00006325 mRNA upstream 77669 2206607 ~ 2208884 (-) True AMCG00006325
AMCG00006326 mRNA upstream 89093 2218031 ~ 2254916 (-) True AMCG00006326
AMCG00006329 mRNA upstream 149209 2278147 ~ 2300524 (-) True AMCG00006329
AMCG00006328 mRNA upstream 195567 2324505 ~ 2329809 (-) False AMCG00006328
TU136306 other downstream 100229 2020001 ~ 2024143 (-) True AMCG00006313
TU136165 other downstream 242535 1881282 ~ 1881837 (-) True G108829
TU136131 other downstream 399524 1722561 ~ 1724848 (-) True AMCG00006298
TU136106 other downstream 464368 1646480 ~ 1660004 (-) True G108784
TU136085 other downstream 649422 1473478 ~ 1474950 (-) False AMCG00006284
TU136502 other upstream 195193 2324131 ~ 2329991 (-) True AMCG00006328
TU137277 other upstream 2035996 4164934 ~ 4165600 (-) True G109633
TU137807 other upstream 3885166 6014104 ~ 6016943 (-) False AMCG00006491
TU137903 other upstream 4656375 6785313 ~ 6785851 (-) True G110140
TU137983 other upstream 4949451 7078389 ~ 7088985 (-) True G110195

Expression Profile