RNA id: AMCG00006323



Basic Information


Item Value
RNA id AMCG00006323
length 429
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00006323
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2204897 ~ 2205971 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTCCTGATTATTTTCATGGCGACTTTTCTGACAAAGGTGTCCTCTGCTCCCATCCCAGTGTCCTCTGCTCCTGTCCCAGTGTCCTCTGCTCCTGTCCCAGTGTCCATGTCAGTGGGCGACTCTGTATCTCTGCCCTGTGATGGAGCTGCAGCTGCTGGGATCTCTGAGGAGAAACTCTACATCCAGTGGAAGATGCCCGGTCAGGACGTGTGGGTGTTCAGCAGTGGATCAGTGTTTCCGGGCCCAGGCTTCGAGGGCAGAGCTGAGGTCCCCATAGAGAAGATCAGACAATGGGACTTCTCTCTGATCATTAACAGCACCCTGCTCTCTGATGGAGGCCTGTACGAGTGTTTATATGAGGGAGAGAACCGTAAAATGACGTTCTTGGGACACTATATTCTCAATGTCACAGGTCTGACTCGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136226 lncRNA upstream 74634 2128318 ~ 2130263 (+) True G108884
TU136219 lncRNA upstream 76897 2098349 ~ 2128000 (+) True G108878
TU136194 lncRNA upstream 171325 2008087 ~ 2033572 (+) True G108856
TU136191 lncRNA upstream 193089 1991615 ~ 2011808 (+) True G108854
TU136184 lncRNA upstream 251855 1952214 ~ 1953042 (+) True G108847
TU136236 lncRNA downstream 44596 2250567 ~ 2289455 (+) True G108889
TU136264 lncRNA downstream 53971 2259942 ~ 2262497 (+) True G108914
TU136373 lncRNA downstream 86726 2292697 ~ 2292896 (+) True G108987
TU136392 lncRNA downstream 144783 2350754 ~ 2356238 (+) True G109004
TU136402 lncRNA downstream 196932 2402903 ~ 2403151 (+) True G109010
AMCG00006324 mRNA upstream 12012 2191525 ~ 2192885 (+) True AMCG00006324
AMCG00006318 mRNA upstream 33523 2154397 ~ 2171374 (+) True AMCG00006318
AMCG00006317 mRNA upstream 67196 2134356 ~ 2137701 (+) True AMCG00006317
AMCG00006310 mRNA upstream 115895 2080532 ~ 2089002 (+) True AMCG00006310
AMCG00006312 mRNA upstream 131574 2068750 ~ 2073323 (+) True AMCG00006312
AMCG00006327 mRNA downstream 160321 2366292 ~ 2371085 (+) True AMCG00006327
AMCG00006330 mRNA downstream 185748 2391719 ~ 2396364 (+) True AMCG00006330
AMCG00006334 mRNA downstream 322260 2528231 ~ 2539840 (+) True AMCG00006334
AMCG00006337 mRNA downstream 383413 2589384 ~ 2594077 (+) True AMCG00006337
AMCG00006338 mRNA downstream 393283 2599254 ~ 2605484 (+) True AMCG00006338
TU135896 other upstream 392222 1808557 ~ 1812675 (+) False G108626
TU135921 other upstream 465630 1735932 ~ 1739267 (+) True AMCG00006294
TU135836 other upstream 774910 1350383 ~ 1429987 (+) True G108585
TU135810 other upstream 918845 1280701 ~ 1286052 (+) True AMCG00006276
TU135722 other upstream 1214075 985873 ~ 990822 (+) False AMCG00006256
TU136837 other downstream 1155383 3361354 ~ 3365565 (+) False G109309
TU136897 other downstream 1297210 3503181 ~ 3506679 (+) True G109362
TU136948 other downstream 1364068 3570039 ~ 3573709 (+) False AMCG00006379
TU136955 other downstream 1393270 3599241 ~ 3599697 (+) False AMCG00006385
TU136960 other downstream 1431772 3637743 ~ 3640661 (+) False AMCG00006387

Expression Profile