Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006342 |
| length | 1392 |
| RNA type | mRNA |
| GC content | 0.65 |
| exon number | 6 |
| gene id | AMCG00006342 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 2606222 ~ 2609426 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005525 | GTP binding | molecular_function |
| GO:0019001 | guanyl nucleotide binding | molecular_function |
| GO:0001882 | nucleoside binding | molecular_function |
| GO:0001883 | purine nucleoside binding | molecular_function |
| GO:0032549 | ribonucleoside binding | molecular_function |
| GO:0032550 | purine ribonucleoside binding | molecular_function |
| GO:0032561 | guanyl ribonucleotide binding | molecular_function |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU136566 | lncRNA | downstream | 20233 | 2582619 ~ 2585989 (-) | True | AMCG00006344 |
| TU136528 | lncRNA | downstream | 208232 | 2394749 ~ 2397990 (-) | True | G109099 |
| TU136514 | lncRNA | downstream | 215670 | 2346522 ~ 2390552 (-) | True | G109090 |
| TU136621 | lncRNA | upstream | 209043 | 2818469 ~ 2832329 (-) | True | G109163 |
| TU136636 | lncRNA | upstream | 279060 | 2888486 ~ 2891893 (-) | False | AMCG00006354 |
| TU136638 | lncRNA | upstream | 283468 | 2892894 ~ 2894534 (-) | False | AMCG00006354 |
| TU136816 | lncRNA | upstream | 676844 | 3286270 ~ 3287229 (-) | True | G109294 |
| TU136854 | lncRNA | upstream | 730692 | 3340118 ~ 3433270 (-) | True | G109322 |
| AMCG00006344 | mRNA | downstream | 19376 | 2581337 ~ 2586846 (-) | False | AMCG00006344 |
| AMCG00006340 | mRNA | downstream | 26566 | 2575661 ~ 2579656 (-) | True | AMCG00006340 |
| AMCG00006333 | mRNA | downstream | 44787 | 2558875 ~ 2561435 (-) | True | AMCG00006333 |
| AMCG00006332 | mRNA | downstream | 56042 | 2540270 ~ 2550180 (-) | True | AMCG00006332 |
| AMCG00006331 | mRNA | downstream | 192261 | 2403555 ~ 2413961 (-) | True | AMCG00006331 |
| AMCG00006343 | mRNA | upstream | 19069 | 2628495 ~ 2631707 (-) | True | AMCG00006343 |
| AMCG00006341 | mRNA | upstream | 41202 | 2650628 ~ 2659502 (-) | True | AMCG00006341 |
| AMCG00006354 | mRNA | upstream | 279069 | 2888495 ~ 2894512 (-) | True | AMCG00006354 |
| AMCG00006357 | mRNA | upstream | 354889 | 2964315 ~ 2964962 (-) | True | AMCG00006357 |
| AMCG00006355 | mRNA | upstream | 356392 | 2965818 ~ 2970452 (-) | True | AMCG00006355 |
| TU136502 | other | downstream | 276231 | 2324131 ~ 2329991 (-) | True | AMCG00006328 |
| TU136304 | other | downstream | 475967 | 2097818 ~ 2130255 (-) | False | G108938 |
| TU136306 | other | downstream | 582079 | 2020001 ~ 2024143 (-) | True | AMCG00006313 |
| TU136165 | other | downstream | 724385 | 1881282 ~ 1881837 (-) | True | G108829 |
| TU136131 | other | downstream | 881374 | 1722561 ~ 1724848 (-) | True | AMCG00006298 |
| TU137277 | other | upstream | 1555508 | 4164934 ~ 4165600 (-) | True | G109633 |
| TU137807 | other | upstream | 3404678 | 6014104 ~ 6016943 (-) | False | AMCG00006491 |
| TU137903 | other | upstream | 4175887 | 6785313 ~ 6785851 (-) | True | G110140 |
| TU137983 | other | upstream | 4468963 | 7078389 ~ 7088985 (-) | True | G110195 |
| TU138386 | other | upstream | 6112962 | 8722388 ~ 8724352 (-) | True | G110507 |
