RNA id: AMCG00006344



Basic Information


Item Value
RNA id AMCG00006344
length 213
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00006344
representative False

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2581337 ~ 2586846 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCTGGCGCACAAACTTTCCCTTTTGAAATTAACTACGGAACTCCAGCAGGGATGGCGTTAATCCCCGCAGCAGCCGCCGACTCCGGCCGCAGAGCTTCAGCGCTCGCTCccgaggagagagaggaagacaagAGGAGTGAGAACGACGAgcgagaggagaggaggggaggggaggagagccAGCAGAAGAGCCGGCCCGCTGCCGTGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136528 lncRNA downstream 183347 2394749 ~ 2397990 (-) True G109099
TU136514 lncRNA downstream 190785 2346522 ~ 2390552 (-) True G109090
TU136621 lncRNA upstream 231623 2818469 ~ 2832329 (-) True G109163
TU136636 lncRNA upstream 301640 2888486 ~ 2891893 (-) False AMCG00006354
TU136638 lncRNA upstream 306048 2892894 ~ 2894534 (-) False AMCG00006354
TU136816 lncRNA upstream 699424 3286270 ~ 3287229 (-) True G109294
TU136854 lncRNA upstream 753272 3340118 ~ 3433270 (-) True G109322
AMCG00006340 mRNA downstream 1681 2575661 ~ 2579656 (-) True AMCG00006340
AMCG00006333 mRNA downstream 19902 2558875 ~ 2561435 (-) True AMCG00006333
AMCG00006332 mRNA downstream 31157 2540270 ~ 2550180 (-) True AMCG00006332
AMCG00006331 mRNA downstream 167376 2403555 ~ 2413961 (-) True AMCG00006331
AMCG00006328 mRNA downstream 251528 2324505 ~ 2329809 (-) False AMCG00006328
AMCG00006342 mRNA upstream 19376 2606222 ~ 2609426 (-) True AMCG00006342
AMCG00006343 mRNA upstream 41649 2628495 ~ 2631707 (-) True AMCG00006343
AMCG00006341 mRNA upstream 63782 2650628 ~ 2659502 (-) True AMCG00006341
AMCG00006354 mRNA upstream 301649 2888495 ~ 2894512 (-) True AMCG00006354
AMCG00006357 mRNA upstream 377469 2964315 ~ 2964962 (-) True AMCG00006357
TU136502 other downstream 251346 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 451082 2097818 ~ 2130255 (-) False G108938
TU136306 other downstream 557194 2020001 ~ 2024143 (-) True AMCG00006313
TU136165 other downstream 699500 1881282 ~ 1881837 (-) True G108829
TU136131 other downstream 856489 1722561 ~ 1724848 (-) True AMCG00006298
TU137277 other upstream 1578088 4164934 ~ 4165600 (-) True G109633
TU137807 other upstream 3427258 6014104 ~ 6016943 (-) False AMCG00006491
TU137903 other upstream 4198467 6785313 ~ 6785851 (-) True G110140
TU137983 other upstream 4491543 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 6135542 8722388 ~ 8724352 (-) True G110507

Expression Profile