RNA id: AMCG00006367



Basic Information


Item Value
RNA id AMCG00006367
length 768
RNA type mRNA
GC content 0.52
exon number 4
gene id AMCG00006367
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3220219 ~ 3232977 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACAGAGCGTGTGTTTGTTCTCACAGGACCCCCCCGTCAGACAGCCACAGTGCGGGGGCTGGTGACTCTGCAGTGTGGAGATGCTGCTCTGTCCTCAGGGAAGGGGAGTGTGAAGTGGagcagagagagacggggggcGGCGATGGAAGACATTCTTACAAGTGTTAAAGGAGGGAACACCAAACACATTGAGGATCGAGAGAGACGCTTTGGTTCTCAAGCAGATGGAGCTCTTTCGATACTTCAAGTGCGGTCTTCAGACTCTGGGAGATACCTGTGTAACGGGATCCCTGCGGTTGACCTGGTGGTGACCCCTGGGTCAGTGAAATACACTGCAGCAGTGGGAGGACAGGCATATCTGCACTGTGGGACCTCAAGGACTCCTTTACACAATGAGAGAGTGCAGTGGAAAGTCACTAAGGATGGTGTTGATTATATTGTGGTGACCAGACAAGAGAATGGAGCTGCAGTTAAAGGAGTTAATGATCCTCAGAACAGATTGTCACTGCTCACTGAAGATGCCTCCCTTCTGATCACTGCTGTTCATCCTGAAGACGCTGGACAGTACAGCTGTAACCAAAAACATCTGGCAGATCTAGAGGTGGTGAGAGACCTGGTCAGAAACATATGTATCGGTGCTGCGGTTGTCGTCCTTGCTGGGATACTGCTCTTCGTGCGGAGAAGACTGTCAACGAAGGGGAGAGAGGCGCAGCACAGCACTGAGCACGTCTACGCTGTGATAGAAGAGCTCACGTCTACGCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136688 lncRNA upstream 150991 3016779 ~ 3069228 (+) False G109218
TU136689 lncRNA upstream 150991 3066362 ~ 3069228 (+) True G109218
TU136687 lncRNA upstream 191573 3004856 ~ 3028646 (+) True G109217
TU136405 lncRNA upstream 701685 2436058 ~ 2518534 (+) False G109011
TU136404 lncRNA upstream 767390 2436058 ~ 2452829 (+) True G109011
TU136755 lncRNA downstream 1928 3234905 ~ 3236401 (+) True G109260
TU136762 lncRNA downstream 14892 3247869 ~ 3252080 (+) False AMCG00006366
TU136782 lncRNA downstream 50159 3283136 ~ 3286179 (+) True AMCG00006368
TU136826 lncRNA downstream 107112 3340089 ~ 3393931 (+) True G109301
TU136838 lncRNA downstream 128377 3361354 ~ 3363115 (+) True G109309
AMCG00006364 mRNA upstream 42680 3151072 ~ 3177539 (+) True AMCG00006364
AMCG00006360 mRNA upstream 108644 3094082 ~ 3111575 (+) True AMCG00006360
AMCG00006359 mRNA upstream 218929 2989143 ~ 3001290 (+) True AMCG00006359
AMCG00006353 mRNA upstream 259687 2955335 ~ 2960532 (+) True AMCG00006353
AMCG00006352 mRNA upstream 275747 2936943 ~ 2944472 (+) True AMCG00006352
AMCG00006366 mRNA downstream 9960 3242937 ~ 3251497 (+) True AMCG00006366
AMCG00006368 mRNA downstream 41805 3274782 ~ 3285081 (+) False AMCG00006368
AMCG00006370 mRNA downstream 59766 3292743 ~ 3301359 (+) True AMCG00006370
AMCG00006373 mRNA downstream 109562 3342539 ~ 3349221 (+) True AMCG00006373
AMCG00006369 mRNA downstream 119228 3352205 ~ 3354806 (+) True AMCG00006369
TU135896 other upstream 1407544 1808557 ~ 1812675 (+) False G108626
TU135921 other upstream 1480952 1735932 ~ 1739267 (+) True AMCG00006294
TU135836 other upstream 1790232 1350383 ~ 1429987 (+) True G108585
TU135810 other upstream 1934167 1280701 ~ 1286052 (+) True AMCG00006276
TU135722 other upstream 2229397 985873 ~ 990822 (+) False AMCG00006256
TU136837 other downstream 128377 3361354 ~ 3365565 (+) False G109309
TU136897 other downstream 270204 3503181 ~ 3506679 (+) True G109362
TU136948 other downstream 337062 3570039 ~ 3573709 (+) False AMCG00006379
TU136955 other downstream 366264 3599241 ~ 3599697 (+) False AMCG00006385
TU136960 other downstream 404766 3637743 ~ 3640661 (+) False AMCG00006387

Expression Profile