RNA id: AMCG00006377


Basic Information

Item Value
RNA id AMCG00006377
length 363
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00006377
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3475991 ~ 3479508 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTCACCACGGAGCAGATCCGCAGTGTGCAGATCCTGCCGGTCGACTACGAGATCGAGTACATCTGCCGCGGTGCGCGCGTCATCGTGGGGCCCAAGGTGCGCAAGTGCCTCCCCAACGGTACCTGGACCGACATGAACCTGCGCAGCCGCTGCCtgctgctGTGTCCGCGGGTGTGGGTGTCCCTGGAGAATGGGGAGGTGCAGGCATGGCCCCCCGGGCCCCCAGTGGAAGGCACCATGCTGCAGTACCGCTGTCTGCCCGGCTTCAGGCTGGGGGGGCGCAACTCCTCACTGTGCACCAAGCTGGGCAAGTGGGACTCTCCCAAACCCGTCTGCCACTGTGAGTCTGGGGTTGTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136854 lncRNA downstream 42721 3340118 ~ 3433270 (-) True G109322
TU136866 lncRNA downstream 106443 3367197 ~ 3369548 (-) True G109334
TU136816 lncRNA downstream 188762 3286270 ~ 3287229 (-) True G109294
TU136638 lncRNA downstream 581457 2892894 ~ 2894534 (-) False AMCG00006354
TU136636 lncRNA downstream 584098 2888486 ~ 2891893 (-) False AMCG00006354
TU137003 lncRNA upstream 69106 3548614 ~ 3561944 (-) True G109432
TU137017 lncRNA upstream 107088 3586596 ~ 3655123 (-) False G109439
TU137019 lncRNA upstream 107088 3586596 ~ 3655123 (-) True G109439
TU137050 lncRNA upstream 219377 3698885 ~ 3714779 (-) False AMCG00006390
TU137060 lncRNA upstream 250534 3730042 ~ 3800123 (-) False AMCG00006398
AMCG00006376 mRNA downstream 23812 3439511 ~ 3452179 (-) True AMCG00006376
AMCG00006371 mRNA downstream 114154 3356795 ~ 3361837 (-) True AMCG00006371
AMCG00006372 mRNA downstream 139738 3329356 ~ 3336253 (-) True AMCG00006372
AMCG00006365 mRNA downstream 272104 3178729 ~ 3203887 (-) True AMCG00006365
AMCG00006362 mRNA downstream 336456 3137907 ~ 3139535 (-) True AMCG00006362
AMCG00006380 mRNA upstream 26803 3506311 ~ 3515208 (-) True AMCG00006380
AMCG00006381 mRNA upstream 36200 3515708 ~ 3524019 (-) True AMCG00006381
AMCG00006382 mRNA upstream 84721 3564229 ~ 3565417 (-) True AMCG00006382
AMCG00006388 mRNA upstream 195322 3674830 ~ 3678417 (-) True AMCG00006388
AMCG00006390 mRNA upstream 234244 3713752 ~ 3728519 (-) True AMCG00006390
TU136502 other downstream 1146000 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 1345736 2097818 ~ 2130255 (-) False G108938
TU136306 other downstream 1451848 2020001 ~ 2024143 (-) True AMCG00006313
TU136165 other downstream 1594154 1881282 ~ 1881837 (-) True G108829
TU136131 other downstream 1751143 1722561 ~ 1724848 (-) True AMCG00006298
TU137277 other upstream 685426 4164934 ~ 4165600 (-) True G109633
TU137807 other upstream 2534596 6014104 ~ 6016943 (-) False AMCG00006491
TU137903 other upstream 3305805 6785313 ~ 6785851 (-) True G110140
TU137983 other upstream 3598881 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 5242880 8722388 ~ 8724352 (-) True G110507

Expression Profile