RNA id: AMCG00006382


Basic Information

Item Value
RNA id AMCG00006382
length 294
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00006382
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3564229 ~ 3565417 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATTAAGAGGGACGGCCGAGGGCATTCGTATTGTGCCGCTAGAGAATCGGTGTTCCCGGTTGGCCTGGTCACAGGGATCTTAGTGCTGATCTCAGTGCTGGGACTCGCTCTGCTCTGCTGGCACAGACGGCGGTGTCACAAAGACCGCGTGAGGAACACCGAGCCCCAGCTCACAACCCAGCACTGCAGCTCGGACCAGGAGGGCACAGAGAGCTCCACCCTGATCAAGAACGGACACCCGGCCAAAGCCAATGGGAACGGGAGTGTGATGGGGAGGGAAATCACTGTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137003 lncRNA downstream 2285 3548614 ~ 3561944 (-) True G109432
TU136854 lncRNA downstream 130959 3340118 ~ 3433270 (-) True G109322
TU136866 lncRNA downstream 194681 3367197 ~ 3369548 (-) True G109334
TU136816 lncRNA downstream 277000 3286270 ~ 3287229 (-) True G109294
TU136638 lncRNA downstream 669695 2892894 ~ 2894534 (-) False AMCG00006354
TU137017 lncRNA upstream 21179 3586596 ~ 3655123 (-) False G109439
TU137019 lncRNA upstream 21179 3586596 ~ 3655123 (-) True G109439
TU137050 lncRNA upstream 133468 3698885 ~ 3714779 (-) False AMCG00006390
TU137060 lncRNA upstream 164625 3730042 ~ 3800123 (-) False AMCG00006398
TU137079 lncRNA upstream 240239 3805656 ~ 3807787 (-) True G109472
AMCG00006381 mRNA downstream 40210 3515708 ~ 3524019 (-) True AMCG00006381
AMCG00006380 mRNA downstream 49021 3506311 ~ 3515208 (-) True AMCG00006380
AMCG00006377 mRNA downstream 84721 3475991 ~ 3479508 (-) True AMCG00006377
AMCG00006376 mRNA downstream 112050 3439511 ~ 3452179 (-) True AMCG00006376
AMCG00006371 mRNA downstream 202392 3356795 ~ 3361837 (-) True AMCG00006371
AMCG00006388 mRNA upstream 109413 3674830 ~ 3678417 (-) True AMCG00006388
AMCG00006390 mRNA upstream 148335 3713752 ~ 3728519 (-) True AMCG00006390
AMCG00006391 mRNA upstream 169874 3735291 ~ 3742281 (-) True AMCG00006391
AMCG00006401 mRNA upstream 210649 3776066 ~ 3778504 (-) True AMCG00006401
AMCG00006398 mRNA upstream 218225 3783642 ~ 3815517 (-) True AMCG00006398
TU136502 other downstream 1234238 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 1433974 2097818 ~ 2130255 (-) False G108938
TU136306 other downstream 1540086 2020001 ~ 2024143 (-) True AMCG00006313
TU136165 other downstream 1682392 1881282 ~ 1881837 (-) True G108829
TU136131 other downstream 1839381 1722561 ~ 1724848 (-) True AMCG00006298
TU137277 other upstream 599517 4164934 ~ 4165600 (-) True G109633
TU137807 other upstream 2448687 6014104 ~ 6016943 (-) False AMCG00006491
TU137903 other upstream 3219896 6785313 ~ 6785851 (-) True G110140
TU137983 other upstream 3512972 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 5156971 8722388 ~ 8724352 (-) True G110507

Expression Profile