RNA id: AMCG00006396


Basic Information

Item Value
RNA id AMCG00006396
length 273
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00006396
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3823571 ~ 3824069 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGTGGACGATCCCTCCAGGCTGTTGAAGACCACCGAGGACGTGATGGTGACATCTGCAAACTCTGAAACACCCAGAGCAGCGGCGACAGGTGACCGTGTCCTCCATGCCGGGAATCGGGAGCACGGTGCCGCACTCGGGGCAGAAATTTGGGTCCCCGTGGAAGCAAGACATGGCAGACAGATGGAGAAAGAGCTGGGCACTGACACCGACACACACATGGGCACGACGGGACCACAGAGTTCACGCAATCCTACCTCCCCAGAATAA

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136961 lncRNA upstream 49027 3772549 ~ 3774544 (+) True G109396
TU136954 lncRNA upstream 68530 3722519 ~ 3755041 (+) True G109392
TU136981 lncRNA upstream 92731 3729887 ~ 3730840 (+) True G109412
TU136971 lncRNA upstream 108792 3699108 ~ 3714779 (+) True G109405
TU136939 lncRNA upstream 201775 3618246 ~ 3621796 (+) False AMCG00006379
TU137110 lncRNA downstream 40416 3864485 ~ 3864732 (+) False AMCG00006393
TU137140 lncRNA downstream 85892 3909961 ~ 3911048 (+) True G109523
TU137147 lncRNA downstream 111911 3935980 ~ 3936902 (+) True G109530
TU137149 lncRNA downstream 119700 3943769 ~ 3943994 (+) True G109532
TU137159 lncRNA downstream 152659 3976728 ~ 4035308 (+) True G109541
AMCG00006392 mRNA upstream 3747 3814613 ~ 3819824 (+) True AMCG00006392
AMCG00006389 mRNA upstream 59943 3749003 ~ 3763628 (+) True AMCG00006389
AMCG00006386 mRNA upstream 154640 3653239 ~ 3668931 (+) True AMCG00006386
AMCG00006387 mRNA upstream 174660 3638162 ~ 3648911 (+) True AMCG00006387
AMCG00006384 mRNA upstream 191450 3623947 ~ 3632121 (+) True AMCG00006384
AMCG00006394 mRNA downstream 1499 3825568 ~ 3826749 (+) True AMCG00006394
AMCG00006395 mRNA downstream 8192 3832261 ~ 3839998 (+) True AMCG00006395
AMCG00006393 mRNA downstream 34865 3858934 ~ 3864544 (+) False AMCG00006393
AMCG00006404 mRNA downstream 69194 3893263 ~ 3896458 (+) True AMCG00006404
AMCG00006410 mRNA downstream 95835 3919904 ~ 3920782 (+) True AMCG00006410
TU136960 other upstream 182910 3637743 ~ 3640661 (+) False AMCG00006387
TU136955 other upstream 223874 3599241 ~ 3599697 (+) False AMCG00006385
TU136948 other upstream 249862 3570039 ~ 3573709 (+) False AMCG00006379
TU136897 other upstream 316892 3503181 ~ 3506679 (+) True G109362
TU136837 other upstream 458006 3361354 ~ 3365565 (+) False G109309
TU137096 other downstream 35204 3859273 ~ 3863270 (+) True AMCG00006393
TU137156 other downstream 139528 3963597 ~ 3963996 (+) True G109538
TU137199 other downstream 328747 4152816 ~ 4155749 (+) True G109570
TU137203 other downstream 335454 4159523 ~ 4161973 (+) False AMCG00006413
TU137384 other downstream 652865 4476934 ~ 4477570 (+) True G109714

Expression Profile