RNA id: AMCG00006446



Basic Information


Item Value
RNA id AMCG00006446
length 294
RNA type mRNA
GC content 0.65
exon number 2
gene id AMCG00006446
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4488497 ~ 4496374 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGCGGGTTGTCGTTCATGTCGGTCACGTTGAAGGTGATTGTGATGGAGCTGGAATGCAGGCCCGTGGGGCTGTCCCTCACGGTCACCTGCACATCGACCAGCGGGCTGTCCCTCAGAGGCTTCGAATCACGGTCCATCCGCATCACCACCGCCGCTGCCCACACTTCCGGCAACAGCGGTGGCCACGCCCCCTCGCCTCGTCACGGCAGACGAGCGGCGCCGGAATTGACCGAACGTGACGTCAGGCGCTTCGCCAGTCCCGTGTCGCTGGCTGCCGAAGGaaaggggtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137383 lncRNA upstream 15489 4468391 ~ 4473008 (+) True G109713
TU137306 lncRNA upstream 111120 4374148 ~ 4377377 (+) True G109655
TU137314 lncRNA upstream 153047 4334323 ~ 4335450 (+) True G109662
TU137312 lncRNA upstream 159219 4328869 ~ 4329278 (+) True G109660
TU137307 lncRNA upstream 172032 4314631 ~ 4316465 (+) True G109656
TU137391 lncRNA downstream 22543 4518917 ~ 4521249 (+) True G109721
TU137446 lncRNA downstream 426758 4923132 ~ 4924794 (+) True G109767
TU137458 lncRNA downstream 521715 5018089 ~ 5020403 (+) True G109779
TU137459 lncRNA downstream 524922 5021296 ~ 5022178 (+) True G109780
TU137465 lncRNA downstream 548042 5044416 ~ 5044633 (+) True G109786
AMCG00006438 mRNA upstream 38028 4441961 ~ 4450469 (+) True AMCG00006438
AMCG00006433 mRNA upstream 128301 4351652 ~ 4360196 (+) True AMCG00006433
AMCG00006432 mRNA upstream 222254 4254334 ~ 4266243 (+) True AMCG00006432
AMCG00006424 mRNA upstream 298411 4187593 ~ 4190086 (+) True AMCG00006424
AMCG00006423 mRNA upstream 303187 4179050 ~ 4185310 (+) True AMCG00006423
AMCG00006444 mRNA downstream 32 4496406 ~ 4516083 (+) True AMCG00006444
AMCG00006445 mRNA downstream 28434 4524808 ~ 4525972 (+) False AMCG00006445
AMCG00006442 mRNA downstream 45738 4542112 ~ 4562075 (+) True AMCG00006442
AMCG00006443 mRNA downstream 74150 4570524 ~ 4571515 (+) True AMCG00006443
AMCG00006450 mRNA downstream 118818 4615192 ~ 4632996 (+) True AMCG00006450
TU137384 other upstream 10927 4476934 ~ 4477570 (+) True G109714
TU137203 other upstream 326524 4159523 ~ 4161973 (+) False AMCG00006413
TU137199 other upstream 332748 4152816 ~ 4155749 (+) True G109570
TU137156 other upstream 524501 3963597 ~ 3963996 (+) True G109538
TU137096 other upstream 625227 3859273 ~ 3863270 (+) True AMCG00006393
TU137394 other downstream 28432 4524806 ~ 4527738 (+) True AMCG00006445
TU137460 other downstream 528521 5024895 ~ 5025906 (+) True G109781
TU137474 other downstream 584507 5080881 ~ 5098698 (+) True G109795
TU137475 other downstream 584507 5080881 ~ 5098698 (+) False G109795
TU137492 other downstream 630983 5127357 ~ 5128829 (+) False AMCG00006459

Expression Profile