Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006493 |
| length | 1278 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 6 |
| gene id | AMCG00006493 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 6051327 ~ 6067994 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0007218 | neuropeptide signaling pathway | biological_process |
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137753 | lncRNA | downstream | 195825 | 5853814 ~ 5855502 (-) | True | G110015 |
| TU137733 | lncRNA | downstream | 246875 | 5803498 ~ 5804452 (-) | True | G109996 |
| TU137732 | lncRNA | downstream | 248066 | 5802572 ~ 5803261 (-) | True | G109995 |
| TU137664 | lncRNA | downstream | 470600 | 5577470 ~ 5580727 (-) | False | AMCG00006476 |
| TU137623 | lncRNA | downstream | 615563 | 5434937 ~ 5435764 (-) | True | G109916 |
| TU137917 | lncRNA | upstream | 752244 | 6820238 ~ 6820568 (-) | True | G110152 |
| TU137931 | lncRNA | upstream | 843882 | 6911876 ~ 6912252 (-) | True | G110165 |
| TU137934 | lncRNA | upstream | 869419 | 6937413 ~ 6937803 (-) | True | G110168 |
| TU137935 | lncRNA | upstream | 876193 | 6944187 ~ 6944474 (-) | True | G110169 |
| TU137984 | lncRNA | upstream | 1038587 | 7106581 ~ 7107138 (-) | False | G110195 |
| AMCG00006491 | mRNA | downstream | 8403 | 6016634 ~ 6042924 (-) | True | AMCG00006491 |
| AMCG00006490 | mRNA | downstream | 50177 | 5994814 ~ 6001150 (-) | True | AMCG00006490 |
| AMCG00006492 | mRNA | downstream | 60184 | 5986650 ~ 5991143 (-) | True | AMCG00006492 |
| AMCG00006486 | mRNA | downstream | 67036 | 5979127 ~ 5984291 (-) | True | AMCG00006486 |
| AMCG00006481 | mRNA | downstream | 268182 | 5772245 ~ 5783145 (-) | True | AMCG00006481 |
| AMCG00006496 | mRNA | upstream | 23231 | 6091225 ~ 6097143 (-) | True | AMCG00006496 |
| AMCG00006498 | mRNA | upstream | 123978 | 6191972 ~ 6217508 (-) | True | AMCG00006498 |
| AMCG00006502 | mRNA | upstream | 686787 | 6754781 ~ 6768791 (-) | True | AMCG00006502 |
| AMCG00006503 | mRNA | upstream | 710373 | 6778367 ~ 6779464 (-) | True | AMCG00006503 |
| AMCG00006506 | mRNA | upstream | 787742 | 6855736 ~ 6860515 (-) | True | AMCG00006506 |
| TU137807 | other | downstream | 34384 | 6014104 ~ 6016943 (-) | False | AMCG00006491 |
| TU137277 | other | downstream | 1885727 | 4164934 ~ 4165600 (-) | True | G109633 |
| TU136502 | other | downstream | 3721336 | 2324131 ~ 2329991 (-) | True | AMCG00006328 |
| TU136304 | other | downstream | 3921072 | 2097818 ~ 2130255 (-) | False | G108938 |
| TU136306 | other | downstream | 4027184 | 2020001 ~ 2024143 (-) | True | AMCG00006313 |
| TU137903 | other | upstream | 717319 | 6785313 ~ 6785851 (-) | True | G110140 |
| TU137983 | other | upstream | 1010395 | 7078389 ~ 7088985 (-) | True | G110195 |
| TU138386 | other | upstream | 2654394 | 8722388 ~ 8724352 (-) | True | G110507 |
| TU138401 | other | upstream | 2719824 | 8787818 ~ 8794062 (-) | True | G110520 |
| TU138464 | other | upstream | 2929643 | 8997637 ~ 8999264 (-) | True | G110570 |
