Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006504 |
| length | 567 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 4 |
| gene id | AMCG00006504 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 6777971 ~ 6783364 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| id | description |
|---|---|
| K03847 | ALG12; alpha-1,6-mannosyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137834 | lncRNA | upstream | 557885 | 6218531 ~ 6220086 (+) | True | G110081 |
| TU137770 | lncRNA | upstream | 793721 | 5983790 ~ 5984250 (+) | True | G110024 |
| TU137769 | lncRNA | upstream | 793721 | 5983956 ~ 5984250 (+) | False | G110024 |
| TU137710 | lncRNA | upstream | 973412 | 5799600 ~ 5804559 (+) | True | G109978 |
| TU137646 | lncRNA | upstream | 1231535 | 5546207 ~ 5546436 (+) | True | G109933 |
| TU137910 | lncRNA | downstream | 12385 | 6795749 ~ 6795994 (+) | True | G110147 |
| TU137927 | lncRNA | downstream | 72516 | 6855880 ~ 6857998 (+) | True | G110161 |
| TU137933 | lncRNA | downstream | 153880 | 6937244 ~ 6937664 (+) | True | G110167 |
| TU137991 | lncRNA | downstream | 359903 | 7143267 ~ 7143659 (+) | True | G110201 |
| TU138035 | lncRNA | downstream | 456722 | 7240086 ~ 7240557 (+) | True | G110240 |
| AMCG00006501 | mRNA | upstream | 231068 | 6541397 ~ 6546903 (+) | False | AMCG00006501 |
| AMCG00006500 | mRNA | upstream | 443128 | 6287734 ~ 6334843 (+) | True | AMCG00006500 |
| AMCG00006499 | mRNA | upstream | 510835 | 6254988 ~ 6267136 (+) | True | AMCG00006499 |
| AMCG00006497 | mRNA | upstream | 543818 | 6222817 ~ 6234153 (+) | True | AMCG00006497 |
| AMCG00006494 | mRNA | upstream | 627173 | 6135507 ~ 6150798 (+) | True | AMCG00006494 |
| AMCG00006505 | mRNA | downstream | 3490 | 6786854 ~ 6793168 (+) | True | AMCG00006505 |
| AMCG00006510 | mRNA | downstream | 233455 | 7016819 ~ 7029460 (+) | True | AMCG00006510 |
| AMCG00006511 | mRNA | downstream | 274274 | 7057638 ~ 7058515 (+) | True | AMCG00006511 |
| AMCG00006508 | mRNA | downstream | 325980 | 7109344 ~ 7116757 (+) | True | AMCG00006508 |
| AMCG00006509 | mRNA | downstream | 365941 | 7149305 ~ 7183103 (+) | True | AMCG00006509 |
| TU137861 | other | upstream | 189572 | 6519865 ~ 6588399 (+) | True | AMCG00006501 |
| TU137762 | other | upstream | 795062 | 5979062 ~ 5982909 (+) | True | G110023 |
| TU137766 | other | upstream | 795062 | 5981196 ~ 5982909 (+) | False | G110023 |
| TU137492 | other | upstream | 1649142 | 5127357 ~ 5128829 (+) | False | AMCG00006459 |
| TU137474 | other | upstream | 1679273 | 5080881 ~ 5098698 (+) | True | G109795 |
| TU137929 | other | downstream | 128512 | 6911876 ~ 6912254 (+) | True | G110163 |
| TU138093 | other | downstream | 870308 | 7653672 ~ 7655194 (+) | True | G110279 |
| TU138304 | other | downstream | 1392396 | 8175760 ~ 8176786 (+) | True | G110445 |
| TU138383 | other | downstream | 1939086 | 8722450 ~ 8724066 (+) | True | AMCG00006552 |
| TU138516 | other | downstream | 2782849 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
