Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006553 |
| length | 1240 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | AMCG00006553 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 8851743 ~ 8856674 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072350 | tricarboxylic acid metabolic process | biological_process |
| GO:0006099 | tricarboxylic acid cycle | biological_process |
| GO:0006101 | citrate metabolic process | biological_process |
| GO:0009060 | aerobic respiration | biological_process |
| GO:0015980 | energy derivation by oxidation of organic compounds | biological_process |
| GO:0045333 | cellular respiration | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138400 | lncRNA | downstream | 57681 | 8783905 ~ 8794062 (-) | False | G110520 |
| TU138203 | lncRNA | downstream | 942515 | 7907558 ~ 7909228 (-) | True | G110369 |
| TU138126 | lncRNA | downstream | 1094891 | 7756625 ~ 7756852 (-) | True | G110309 |
| TU138069 | lncRNA | downstream | 1283584 | 7567888 ~ 7568159 (-) | True | G110271 |
| TU138068 | lncRNA | downstream | 1284176 | 7567204 ~ 7567567 (-) | True | G110270 |
| TU138472 | lncRNA | upstream | 153466 | 9010140 ~ 9014326 (-) | True | G110576 |
| TU138492 | lncRNA | upstream | 619808 | 9476482 ~ 9477506 (-) | True | G110594 |
| TU138511 | lncRNA | upstream | 688821 | 9545495 ~ 9560104 (-) | True | G110605 |
| TU138671 | lncRNA | upstream | 1448257 | 10304931 ~ 10305247 (-) | True | G110720 |
| TU138687 | lncRNA | upstream | 1564887 | 10421561 ~ 10470060 (-) | True | G110733 |
| AMCG00006550 | mRNA | downstream | 339121 | 8477343 ~ 8512622 (-) | True | AMCG00006550 |
| AMCG00006549 | mRNA | downstream | 427145 | 8419388 ~ 8424598 (-) | True | AMCG00006549 |
| AMCG00006547 | mRNA | downstream | 668189 | 8174241 ~ 8183554 (-) | True | AMCG00006547 |
| AMCG00006548 | mRNA | downstream | 682352 | 8169002 ~ 8169391 (-) | True | AMCG00006548 |
| AMCG00006545 | mRNA | downstream | 714532 | 8128879 ~ 8137211 (-) | True | AMCG00006545 |
| AMCG00006554 | mRNA | upstream | 1671 | 8858345 ~ 8869522 (-) | True | AMCG00006554 |
| AMCG00006559 | mRNA | upstream | 31017 | 8887691 ~ 8912003 (-) | True | AMCG00006559 |
| AMCG00006562 | mRNA | upstream | 338762 | 9195436 ~ 9197467 (-) | True | AMCG00006562 |
| AMCG00006571 | mRNA | upstream | 714815 | 9571489 ~ 9587506 (-) | True | AMCG00006571 |
| AMCG00006570 | mRNA | upstream | 732257 | 9588931 ~ 9592122 (-) | True | AMCG00006570 |
| TU138401 | other | downstream | 57681 | 8787818 ~ 8794062 (-) | True | G110520 |
| TU138386 | other | downstream | 127391 | 8722388 ~ 8724352 (-) | True | G110507 |
| TU137983 | other | downstream | 1762758 | 7078389 ~ 7088985 (-) | True | G110195 |
| TU137903 | other | downstream | 2065892 | 6785313 ~ 6785851 (-) | True | G110140 |
| TU137807 | other | downstream | 2834800 | 6014104 ~ 6016943 (-) | False | AMCG00006491 |
| TU138464 | other | upstream | 140963 | 8997637 ~ 8999264 (-) | True | G110570 |
| TU138509 | other | upstream | 688821 | 9545495 ~ 9552080 (-) | False | G110605 |
| TU138641 | other | upstream | 1230604 | 10087278 ~ 10107285 (-) | True | AMCG00006579 |
| TU139024 | other | upstream | 3161208 | 12017882 ~ 12024548 (-) | False | AMCG00006618 |
| TU139089 | other | upstream | 3280508 | 12137182 ~ 12140393 (-) | True | AMCG00006625 |
