Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006581 |
| length | 324 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 3 |
| gene id | AMCG00006581 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 10159993 ~ 10179843 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K21872 | PPHLN1; periphilin-1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138618 | lncRNA | upstream | 128147 | 10030426 ~ 10031846 (+) | True | G110681 |
| TU138486 | lncRNA | upstream | 703082 | 9456665 ~ 9456911 (+) | True | G110590 |
| TU138446 | lncRNA | upstream | 1271501 | 8887686 ~ 8888492 (+) | True | G110558 |
| TU138404 | lncRNA | upstream | 1364662 | 8795060 ~ 8795331 (+) | True | G110523 |
| TU138306 | lncRNA | upstream | 1980305 | 8179441 ~ 8179688 (+) | True | G110447 |
| TU138673 | lncRNA | downstream | 189872 | 10369715 ~ 10369931 (+) | True | G110722 |
| TU138835 | lncRNA | downstream | 940547 | 11120390 ~ 11120735 (+) | True | G110849 |
| TU138877 | lncRNA | downstream | 1170041 | 11349884 ~ 11350117 (+) | True | G110883 |
| TU138920 | lncRNA | downstream | 1491726 | 11671569 ~ 11672448 (+) | True | G110916 |
| TU138936 | lncRNA | downstream | 1613325 | 11793168 ~ 11793535 (+) | True | G110930 |
| AMCG00006577 | mRNA | upstream | 175766 | 9968172 ~ 9984227 (+) | True | AMCG00006577 |
| AMCG00006576 | mRNA | upstream | 307665 | 9850650 ~ 9852328 (+) | True | AMCG00006576 |
| AMCG00006574 | mRNA | upstream | 320129 | 9806029 ~ 9839864 (+) | True | AMCG00006574 |
| AMCG00006575 | mRNA | upstream | 408098 | 9721539 ~ 9751895 (+) | True | AMCG00006575 |
| AMCG00006567 | mRNA | upstream | 503377 | 9653307 ~ 9656616 (+) | True | AMCG00006567 |
| AMCG00006590 | mRNA | downstream | 332329 | 10512172 ~ 10518858 (+) | True | AMCG00006590 |
| AMCG00006589 | mRNA | downstream | 413454 | 10593297 ~ 10617772 (+) | True | AMCG00006589 |
| AMCG00006596 | mRNA | downstream | 581325 | 10761168 ~ 10763850 (+) | True | AMCG00006596 |
| AMCG00006595 | mRNA | downstream | 606417 | 10786260 ~ 10818604 (+) | True | AMCG00006595 |
| AMCG00006593 | mRNA | downstream | 648472 | 10828315 ~ 10829509 (+) | True | AMCG00006593 |
| TU138516 | other | upstream | 592642 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
| TU138383 | other | upstream | 1435927 | 8722450 ~ 8724066 (+) | True | AMCG00006552 |
| TU138304 | other | upstream | 1983207 | 8175760 ~ 8176786 (+) | True | G110445 |
| TU138093 | other | upstream | 2504799 | 7653672 ~ 7655194 (+) | True | G110279 |
| TU137929 | other | upstream | 3247739 | 6911876 ~ 6912254 (+) | True | G110163 |
| TU139270 | other | downstream | 2831341 | 13011184 ~ 13043448 (+) | True | G111197 |
| TU140941 | other | downstream | 10757654 | 20937497 ~ 20938170 (+) | False | AMCG00006811 |
| TU140974 | other | downstream | 10868493 | 21048336 ~ 21049038 (+) | True | G112567 |
| TU141018 | other | downstream | 10963022 | 21142865 ~ 21203201 (+) | True | G112600 |
| TU141703 | other | downstream | 13852270 | 24032113 ~ 24036112 (+) | False | AMCG00006878 |
