RNA id: AMCG00006584



Basic Information


Item Value
RNA id AMCG00006584
length 1200
RNA type mRNA
GC content 0.51
exon number 9
gene id AMCG00006584
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10375934 ~ 10385675 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTTCAGTGAGCTGTGGAAAAGGAACCAAACACCGTGATGTTTTCTGCGTTGACCAAGACCAAACCCAAGTAGAAGAACAACACTGCGATCTTCTGCCCAAACCTCGGATTCACAAGTCCTGTCGGTCAAGGAGATGCCCCAGctggaaagcaaacaaatggaAGGAGTGCTCACTGTCATGTGGGGTTGGGATTCAGCAAAGGGAGGTCTACTGCAGGATGAAGGGTACGGGCAGAGTGGCCGAAGGGCTGTGTAACCCACTCAGCCGGCCCACCAGCACACAGCAGTGCAGCTCCTCTGACTGTCTCCATTACCAGTGGGTAGCAGATGAATGGCAAGATTGCAATGCGAGCTGCGGTGAAGGAACGAGGAACCGAAAACTCTCTTGTGTGGATCAAGCAATGAACCCGGTTAATGAGAGACACTGCAACTCTTCATCCAAACCAGCAGCTTCCCAGACATGCAAGACTGTCCCTTGTGAATACATCTGGATCACAGGAGACTGGTCACAGTGTTCAACAAGCTGTGGACCTGGATTTCAACAGCGGATGATTTCCTGCTCAGAGGTGCACTCGTCCCAGGACCTCTACTCATACACCCCCCAGTCTTTGCCCCATGCCGAGTGTCCACAGCCCTATCCCCCCGAGAGGCAGGACTGTAATATAAGCGAGTGTCCTCCTGTAGCTGCCTGGAAAGTCAGACCCTGGAGTAAGTGCTCTCTGACTTGTGGAGCCGGGGTGATGGAGAGAAGAGTGGAGTGCCTGACCTCAAAGGATCAACCGTCAAAAAGTTGTCGCCAAATTGAGAAGCCAGAATCCCATGCTGCCTGtcaagagagagagtGTGAACTGTTCACAAGCTGCAGAGAGGTGCAGATTAAAGAAGAATTCAGAAAAGATGGGGAATATTTTCTccgtattaaaaacaaaattctccAGATCTACTGTGCTGATATGCAAACCAGTTATCCAAAAGAATATGTGTCCTTACGTAGCGGTCAGACGGACAACTTTTCAGAAGTATATGGATACAGAAACGACTATCCGGCGGCTGGATACACACTTTTTCACAAGGTCCGACTGGACGTCAGCGCCATGCAGATAATAACAACAGACCTCCTCTTTACTCAAACTCTCCTGGGGAGGGCAGTGCCTTTCGCCACAGCAGGGGACTGCTACAGTGCTGCTAAATGCCCACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138671 lncRNA downstream 70687 10304931 ~ 10305247 (-) True G110720
TU138511 lncRNA downstream 815830 9545495 ~ 9560104 (-) True G110605
TU138492 lncRNA downstream 898428 9476482 ~ 9477506 (-) True G110594
TU138472 lncRNA downstream 1361608 9010140 ~ 9014326 (-) True G110576
TU138400 lncRNA downstream 1581872 8783905 ~ 8794062 (-) False G110520
TU138687 lncRNA upstream 35886 10421561 ~ 10470060 (-) True G110733
TU138722 lncRNA upstream 217420 10603095 ~ 10603733 (-) True G110757
TU138921 lncRNA upstream 1285894 11671569 ~ 11672483 (-) True G110917
TU138945 lncRNA upstream 1403265 11788940 ~ 11789234 (-) True G110939
TU138946 lncRNA upstream 1404377 11790052 ~ 11793501 (-) True G110940
AMCG00006582 mRNA downstream 177248 10182177 ~ 10198686 (-) True AMCG00006582
AMCG00006578 mRNA downstream 260131 10110461 ~ 10115803 (-) True AMCG00006578
AMCG00006579 mRNA downstream 286296 10087275 ~ 10089638 (-) False AMCG00006579
AMCG00006580 mRNA downstream 291100 10069022 ~ 10084834 (-) True AMCG00006580
AMCG00006572 mRNA downstream 750042 9624085 ~ 9625892 (-) True AMCG00006572
AMCG00006583 mRNA upstream 17899 10403574 ~ 10422520 (-) True AMCG00006583
AMCG00006585 mRNA upstream 58550 10444225 ~ 10467706 (-) True AMCG00006585
AMCG00006586 mRNA upstream 120376 10506051 ~ 10511361 (-) True AMCG00006586
AMCG00006587 mRNA upstream 135637 10521312 ~ 10527300 (-) True AMCG00006587
AMCG00006588 mRNA upstream 165753 10551428 ~ 10551733 (-) True AMCG00006588
TU138641 other downstream 268649 10087278 ~ 10107285 (-) True AMCG00006579
TU138509 other downstream 823854 9545495 ~ 9552080 (-) False G110605
TU138464 other downstream 1376670 8997637 ~ 8999264 (-) True G110570
TU138401 other downstream 1581872 8787818 ~ 8794062 (-) True G110520
TU138386 other downstream 1651582 8722388 ~ 8724352 (-) True G110507
TU139024 other upstream 1632207 12017882 ~ 12024548 (-) False AMCG00006618
TU139089 other upstream 1751507 12137182 ~ 12140393 (-) True AMCG00006625
TU139243 other upstream 2490617 12876292 ~ 12878656 (-) False AMCG00006641
TU139244 other upstream 2490617 12876292 ~ 12878656 (-) True AMCG00006641
TU139375 other upstream 3069757 13455432 ~ 13503228 (-) True AMCG00006663

Expression Profile